RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 RNF41Q9H4P4 317 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 PIH1D3Q9NQM4 214 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 ANAPC4Q9UJX5 808 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 GGA1Q9UJY5 639 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 ATP6V0A2Q9Y487 856 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 LAMB1P07942 1786 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 ZNF532Q9HCE3 1301 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 IDH1O75874 414 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 CYP21A2P08686 494 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 AK2P54819 239 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 FKBP1AP62942 108 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 ZNF827Q17R98 1081 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 POTEAQ6S8J7 498 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 LRP2BPQ9P2M1 347 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 FAM205AQ6ZU69 1335 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 WDR33Q9C0J8 1336 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 M0R2C6 588 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 ZNF213O14771 459 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 DHX16O60231 1041 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 CD2BP2O95400 341 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 SRGNP10124 158 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 PLCG2P16885 1265 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 SLC4A3P48751 1232 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 BCAMP50895 628 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 EXOSC10Q01780 885 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 TRDNQ13061 729 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 PPP2R5BQ15173 497 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 NFKBIBQ15653 356 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 TMTC2Q8N394 836 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 HELBQ8NG08 1087 aaPredicted RBP8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 NCOA7Q8NI08 942 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 CNKSR1Q969H4 720 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 FAM163AQ96GL9 167 aaPredicted RBP8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 TMEM87BQ96K49 555 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 EYA3Q99504 573 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 KRT23Q9C075 422 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 COL4A1P02462 1669 aa8.1□□□□□ -1.11
ECHDC1-210ENST00000454859 MCM5P33992 734 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 MMP14P50281 582 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 MRIQ9BWK5 157 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 COA1Q9GZY4 146 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 ATP8A2Q9NTI2 1148 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 ANKIB1Q9P2G1 1089 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 COL11A2P13942 1736 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 E7EWF7 191 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 FGAP02671 866 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 PPP4CP60510 307 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 HMGN5P82970 282 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 MAGEB6Q8N7X4 407 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 SUPT20HQ8NEM7 779 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 PUS7LQ9H0K6 701 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 FOCADQ5VW36 1801 aa8.09□□□□□ -1.11
ECHDC1-210ENST00000454859 PSME4Q14997 1843 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 MAGEB6P1A0A0J9YX57 407 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 PPEF1O14829 653 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 CSPP1Q1MSJ5 1256 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 SBK1Q52WX2 424 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 CCDC178Q5BJE1 867 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 NAA16Q6N069 864 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 RALYLQ86SE5 291 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 UPF3BQ9BZI7 483 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 SLKQ9H2G2 1235 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 NID2Q14112 1375 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 H0YIN7 160 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 PFKFB2O60825 505 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 BRD1O95696 1058 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 BAG3O95817 575 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 SLC3A2P08195 630 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 MMP10P09238 476 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 FGRP09769 529 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 MCM4P33991 863 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 ADCK5Q3MIX3 580 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 SOGA3Q5TF21 947 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 STAG1Q8WVM7 1258 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 SEC62Q99442 399 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 RTFDC1Q9BY42 306 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 CRNKL1Q9BZJ0 848 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 WWC3Q9ULE0 1092 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 ISY1Q9ULR0 285 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 SMC3Q9UQE7 1217 aa8.08□□□□□ -1.12
ECHDC1-210ENST00000454859 FRAT2O75474 233 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 CYP7A1P22680 504 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 GYG1P46976 350 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 IFNL3Q8IZI9 196 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 NSUN4Q96CB9 384 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 NOL10Q9BSC4 688 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 NAPBQ9H115 298 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 C10orf71Q711Q0 1435 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 MYH2Q9UKX2 1941 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 COL1A1P02452 1464 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 FOXP2O15409 715 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 LDHBP07195 334 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 LIFRP42702 1097 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 SART3Q15020 963 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 ATL3Q6DD88 541 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 CCDC129Q6ZRS4 1044 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 MB21D2Q8IYB1 491 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 TBC1D16Q8TBP0 767 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 RIOK1Q9BRS2 568 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 ZNF287Q9HBT7 754 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms