RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 C4AP0C0L4 1744 aa22.14■■□□□ 1.14
SDCBP-204ENST00000447182 C4BP0C0L5 1744 aa22.14■■□□□ 1.14
SDCBP-204ENST00000447182 CPLX1O14810 134 aa22.14■■□□□ 1.13
SDCBP-204ENST00000447182 IKBKBO14920 756 aa22.14■■□□□ 1.13
SDCBP-204ENST00000447182 SLU7O95391 586 aaKnown RBP22.14■■□□□ 1.13
SDCBP-204ENST00000447182 HAND2P61296 217 aa22.14■■□□□ 1.13
SDCBP-204ENST00000447182 WASHC4Q2M389 1173 aa22.14■■□□□ 1.13
SDCBP-204ENST00000447182 ARMCX5Q6P1M9 558 aa22.14■■□□□ 1.13
SDCBP-204ENST00000447182 FBXW7Q969H0 707 aa22.14■■□□□ 1.13
SDCBP-204ENST00000447182 XAGE2Q96GT9 111 aa22.14■■□□□ 1.13
SDCBP-204ENST00000447182 KCPQ6ZWJ8 1503 aa22.14■■□□□ 1.13
SDCBP-204ENST00000447182 GABPB1Q06547 395 aaPredicted RBP22.13■■□□□ 1.13
SDCBP-204ENST00000447182 L2HGDHQ9H9P8 463 aa22.13■■□□□ 1.13
SDCBP-204ENST00000447182 MYH7P12883 1935 aa22.13■■□□□ 1.13
SDCBP-204ENST00000447182 KIF28PB7ZC32 967 aa22.13■■□□□ 1.13
SDCBP-204ENST00000447182 SMC2O95347 1197 aa22.13■■□□□ 1.13
SDCBP-204ENST00000447182 A1BGP04217 495 aa22.13■■□□□ 1.13
SDCBP-204ENST00000447182 ZBTB3Q9H5J0 574 aa22.13■■□□□ 1.13
SDCBP-204ENST00000447182 CPDO75976 1380 aa22.13■■□□□ 1.13
SDCBP-204ENST00000447182 PAPPAQ13219 1627 aa22.13■■□□□ 1.13
SDCBP-204ENST00000447182 ERVV-2B6SEH9 535 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 PFKFB1P16118 471 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 SFPQP23246 707 aaKnown RBP eCLIP22.12■■□□□ 1.13
SDCBP-204ENST00000447182 SLC39A14Q15043 492 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 CCDC57Q2TAC2 916 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 KMT5BQ4FZB7 885 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 GORABQ5T7V8 394 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 TMC6Q7Z403 805 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 RALYLQ86SE5 291 aaKnown RBP22.12■■□□□ 1.13
SDCBP-204ENST00000447182 ISCA1Q9BUE6 129 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 ADORA1P30542 326 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 CHRNA2Q15822 529 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 PPP1R13BQ96KQ4 1090 aa22.12■■□□□ 1.13
SDCBP-204ENST00000447182 ZNF213O14771 459 aa22.11■■□□□ 1.13
SDCBP-204ENST00000447182 NRDCO43847 1150 aa22.11■■□□□ 1.13
SDCBP-204ENST00000447182 PUS7LQ9H0K6 701 aaKnown RBP22.11■■□□□ 1.13
SDCBP-204ENST00000447182 FAM53CQ9NYF3 392 aa22.11■■□□□ 1.13
SDCBP-204ENST00000447182 TUBE1Q9UJT0 475 aa22.11■■□□□ 1.13
SDCBP-204ENST00000447182 PCDH11XQ9BZA7 1347 aa22.1■■□□□ 1.13
SDCBP-204ENST00000447182 PCDH11YQ9BZA8 1340 aa22.1■■□□□ 1.13
SDCBP-204ENST00000447182 TNS3Q68CZ2 1445 aa22.1■■□□□ 1.13
SDCBP-204ENST00000447182 FAM237AA0A1B0GTK4 181 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 GPAA1O43292 621 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 PPP6R2O75170 966 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 WDHD1O75717 1129 aaPredicted RBP22.09■■□□□ 1.13
SDCBP-204ENST00000447182 SCARF1Q14162 830 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 CABLES1Q8TDN4 633 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 PLA2G12BQ9BX93 195 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 GJB4Q9NTQ9 266 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 HPSEQ9Y251 543 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 MROH7-TTC4A0A0A0MT08 1334 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 ZMYM6O95789 1325 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 BIN1O00499 593 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 ZAP70P43403 619 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 TRIM28Q13263 835 aaKnown RBP22.09■■□□□ 1.13
SDCBP-204ENST00000447182 ELF2Q15723 593 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 CCDC93Q567U6 631 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 HSD3B7Q9H2F3 369 aa22.09■■□□□ 1.13
SDCBP-204ENST00000447182 FANCCQ00597 558 aa22.08■■□□□ 1.13
SDCBP-204ENST00000447182 FBXO38Q6PIJ6 1188 aa22.08■■□□□ 1.13
SDCBP-204ENST00000447182 TCIRG1Q13488 830 aa22.07■■□□□ 1.12
SDCBP-204ENST00000447182 KRT222Q8N1A0 295 aa22.07■■□□□ 1.12
SDCBP-204ENST00000447182 JMYQ8N9B5 988 aa22.07■■□□□ 1.12
SDCBP-204ENST00000447182 DDX17Q92841 729 aaKnown RBP22.07■■□□□ 1.12
SDCBP-204ENST00000447182 ANGEL1Q9UNK9 670 aaKnown RBP22.07■■□□□ 1.12
SDCBP-204ENST00000447182 DCCP43146 1447 aa22.07■■□□□ 1.12
SDCBP-204ENST00000447182 TNS2Q63HR2 1409 aa22.07■■□□□ 1.12
SDCBP-204ENST00000447182 CCP110O43303 1012 aa22.07■■□□□ 1.12
SDCBP-204ENST00000447182 CDKL5O76039 1030 aa22.07■■□□□ 1.12
SDCBP-204ENST00000447182 SYKP43405 635 aa22.07■■□□□ 1.12
SDCBP-204ENST00000447182 ATRNO75882 1429 aa22.06■■□□□ 1.12
SDCBP-204ENST00000447182 MYO1BO43795 1136 aa22.06■■□□□ 1.12
SDCBP-204ENST00000447182 CSF1RP07333 972 aa22.06■■□□□ 1.12
SDCBP-204ENST00000447182 ATF3P18847 181 aa22.06■■□□□ 1.12
SDCBP-204ENST00000447182 NKX1-1Q15270 411 aaPredicted RBP22.06■■□□□ 1.12
SDCBP-204ENST00000447182 ZCRB1Q8TBF4 217 aaKnown RBP22.06■■□□□ 1.12
SDCBP-204ENST00000447182 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.06■■□□□ 1.12
SDCBP-204ENST00000447182 NBPF3Q9H094 633 aa22.06■■□□□ 1.12
SDCBP-204ENST00000447182 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.06■■□□□ 1.12
SDCBP-204ENST00000447182 V9GYY5 206 aaPredicted RBP22.06■■□□□ 1.12
SDCBP-204ENST00000447182 TRDNQ13061 729 aa22.06■■□□□ 1.12
SDCBP-204ENST00000447182 PTPAQ15257 358 aa22.06■■□□□ 1.12
SDCBP-204ENST00000447182 VPS37DQ86XT2 251 aa22.06■■□□□ 1.12
SDCBP-204ENST00000447182 ALG1Q9BT22 464 aa22.06■■□□□ 1.12
SDCBP-204ENST00000447182 AKAP11Q9UKA4 1901 aa22.05■■□□□ 1.12
SDCBP-204ENST00000447182 CBFA2T2O43439 604 aa22.05■■□□□ 1.12
SDCBP-204ENST00000447182 PCCAP05165 728 aaPredicted RBP22.05■■□□□ 1.12
SDCBP-204ENST00000447182 LMOD1P29536 600 aaPredicted RBP22.05■■□□□ 1.12
SDCBP-204ENST00000447182 RAB11FIP4Q86YS3 637 aa22.05■■□□□ 1.12
SDCBP-204ENST00000447182 ZNF512BQ96KM6 892 aaPredicted RBP22.05■■□□□ 1.12
SDCBP-204ENST00000447182 MARCKSP29966 332 aaPredicted RBP22.04■■□□□ 1.12
SDCBP-204ENST00000447182 MYL5Q02045 173 aa22.04■■□□□ 1.12
SDCBP-204ENST00000447182 SHC4Q6S5L8 630 aa22.04■■□□□ 1.12
SDCBP-204ENST00000447182 SYT10Q6XYQ8 523 aa22.04■■□□□ 1.12
SDCBP-204ENST00000447182 SH2B2O14492 632 aaPredicted RBP22.04■■□□□ 1.12
SDCBP-204ENST00000447182 ADD2P35612 726 aa22.04■■□□□ 1.12
SDCBP-204ENST00000447182 METAP2P50579 478 aaKnown RBP eCLIP22.04■■□□□ 1.12
SDCBP-204ENST00000447182 RESP18Q5W5W9 173 aa22.04■■□□□ 1.12
SDCBP-204ENST00000447182 KRT40Q6A162 431 aa22.04■■□□□ 1.12
SDCBP-204ENST00000447182 TMX1Q9H3N1 280 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms