RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 TGFB2P61812 414 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 HSP90AB4PQ58FF6 505 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 DDX46Q7L014 1031 aaKnown RBP13.45□□□□□ -0.26
LMO3-207ENST00000439600 SCUBE3Q8IX30 993 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 SYNE4Q8N205 404 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 PNMA1Q8ND90 353 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 LRRN4Q8WUT4 740 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 RPGRQ92834 1020 aaKnown RBP13.45□□□□□ -0.26
LMO3-207ENST00000439600 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
LMO3-207ENST00000439600 PPP4R2Q9NY27 417 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
LMO3-207ENST00000439600 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
LMO3-207ENST00000439600 LYPD8Q6UX82 237 aa13.44□□□□□ -0.26
LMO3-207ENST00000439600 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
LMO3-207ENST00000439600 CDC5LQ99459 802 aaKnown RBP13.44□□□□□ -0.26
LMO3-207ENST00000439600 KRTAP3-3Q9BYR6 98 aa13.44□□□□□ -0.26
LMO3-207ENST00000439600 KRTAP3-2Q9BYR7 98 aa13.44□□□□□ -0.26
LMO3-207ENST00000439600 CD2APQ9Y5K6 639 aa13.44□□□□□ -0.26
LMO3-207ENST00000439600 RIC1Q4ADV7 1423 aa13.44□□□□□ -0.26
LMO3-207ENST00000439600 SCN7AQ01118 1682 aa13.44□□□□□ -0.26
LMO3-207ENST00000439600 NPR1P16066 1061 aa13.43□□□□□ -0.26
LMO3-207ENST00000439600 HDAC1Q13547 482 aaPredicted RBP13.43□□□□□ -0.26
LMO3-207ENST00000439600 TAF7LQ5H9L4 462 aa13.43□□□□□ -0.26
LMO3-207ENST00000439600 SSH3Q8TE77 659 aa13.43□□□□□ -0.26
LMO3-207ENST00000439600 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
LMO3-207ENST00000439600 RTL9Q8NET4 1388 aa13.43□□□□□ -0.26
LMO3-207ENST00000439600 ARFGEF2Q9Y6D5 1785 aa13.43□□□□□ -0.26
LMO3-207ENST00000439600 BBOX1O75936 387 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 HOXA10P31260 410 aaPredicted RBP13.42□□□□□ -0.26
LMO3-207ENST00000439600 IGHMBP2P38935 993 aaKnown RBP13.42□□□□□ -0.26
LMO3-207ENST00000439600 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 EPHA10Q5JZY3 1008 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 BLOC1S3Q6QNY0 202 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 THSD4Q6ZMP0 1018 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 TMC4Q7Z404 712 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 THAP11Q96EK4 314 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 MASTLQ96GX5 879 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 CCDC136Q96JN2 1154 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 CRAMP1Q96RY5 1269 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 BCORQ6W2J9 1755 aa13.42□□□□□ -0.26
LMO3-207ENST00000439600 ITGA6P23229 1130 aa13.41□□□□□ -0.26
LMO3-207ENST00000439600 G3BP1Q13283 466 aaKnown RBP eCLIP13.41□□□□□ -0.26
LMO3-207ENST00000439600 STYK1Q6J9G0 422 aa13.41□□□□□ -0.26
LMO3-207ENST00000439600 RNF19BQ6ZMZ0 732 aa13.41□□□□□ -0.26
LMO3-207ENST00000439600 ANKRD18AQ8IVF6 992 aa13.41□□□□□ -0.26
LMO3-207ENST00000439600 CCDC24Q8N4L8 307 aa13.41□□□□□ -0.26
LMO3-207ENST00000439600 CNKSR1Q969H4 720 aa13.41□□□□□ -0.26
LMO3-207ENST00000439600 GCC1Q96CN9 775 aa13.41□□□□□ -0.26
LMO3-207ENST00000439600 MPHOSPH8Q99549 860 aa13.41□□□□□ -0.26
LMO3-207ENST00000439600 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
LMO3-207ENST00000439600 WBP1LQ9NX94 342 aa13.41□□□□□ -0.26
LMO3-207ENST00000439600 PPP1R1BQ9UD71 204 aaPredicted RBP13.41□□□□□ -0.26
LMO3-207ENST00000439600 C4AP0C0L4 1744 aa13.4□□□□□ -0.26
LMO3-207ENST00000439600 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
LMO3-207ENST00000439600 SRGNP10124 158 aa13.4□□□□□ -0.26
LMO3-207ENST00000439600 RPS8P62241 208 aaKnown RBP13.4□□□□□ -0.26
LMO3-207ENST00000439600 IRF5Q13568 498 aa13.4□□□□□ -0.26
LMO3-207ENST00000439600 C2CD5Q86YS7 1000 aa13.4□□□□□ -0.26
LMO3-207ENST00000439600 ERC1Q8IUD2 1116 aa13.4□□□□□ -0.26
LMO3-207ENST00000439600 GREM2Q9H772 168 aa13.4□□□□□ -0.26
LMO3-207ENST00000439600 NUP98P52948 1817 aa13.39□□□□□ -0.27
LMO3-207ENST00000439600 PNMA6EA0A0J9YXQ4 647 aa13.39□□□□□ -0.27
LMO3-207ENST00000439600 SURF6O75683 361 aaKnown RBP13.39□□□□□ -0.27
LMO3-207ENST00000439600 CIAO1O76071 339 aa13.39□□□□□ -0.27
LMO3-207ENST00000439600 GRAPQ13588 217 aa13.39□□□□□ -0.27
LMO3-207ENST00000439600 LDHAL6AQ6ZMR3 332 aa13.39□□□□□ -0.27
LMO3-207ENST00000439600 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
LMO3-207ENST00000439600 DCTPP1Q9H773 170 aa13.39□□□□□ -0.27
LMO3-207ENST00000439600 BSDC1Q9NW68 430 aaPredicted RBP13.39□□□□□ -0.27
LMO3-207ENST00000439600 NOP58Q9Y2X3 529 aaKnown RBP13.39□□□□□ -0.27
LMO3-207ENST00000439600 ABCC12Q96J65 1359 aa13.39□□□□□ -0.27
LMO3-207ENST00000439600 IL15P40933 162 aaPredicted RBP13.38□□□□□ -0.27
LMO3-207ENST00000439600 PTPN12Q05209 780 aaKnown RBP13.38□□□□□ -0.27
LMO3-207ENST00000439600 OS9Q13438 667 aaPredicted RBP13.38□□□□□ -0.27
LMO3-207ENST00000439600 SIRT2Q8IXJ6 389 aa13.38□□□□□ -0.27
LMO3-207ENST00000439600 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.27
LMO3-207ENST00000439600 CCDC85AQ96PX6 553 aaPredicted RBP13.38□□□□□ -0.27
LMO3-207ENST00000439600 GPR37L1O60883 481 aa13.37□□□□□ -0.27
LMO3-207ENST00000439600 JUNDP17535 347 aa13.37□□□□□ -0.27
LMO3-207ENST00000439600 RFX5P48382 616 aaPredicted RBP13.37□□□□□ -0.27
LMO3-207ENST00000439600 MSS51Q4VC12 460 aa13.37□□□□□ -0.27
LMO3-207ENST00000439600 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
LMO3-207ENST00000439600 CENPQQ7L2Z9 268 aaPredicted RBP13.37□□□□□ -0.27
LMO3-207ENST00000439600 CALR3Q96L12 384 aaKnown RBP13.37□□□□□ -0.27
LMO3-207ENST00000439600 CNNM1Q9NRU3 951 aa13.37□□□□□ -0.27
LMO3-207ENST00000439600 PIM2Q9P1W9 311 aa13.37□□□□□ -0.27
LMO3-207ENST00000439600 MROH5Q6ZUA9 1318 aa13.37□□□□□ -0.27
LMO3-207ENST00000439600 EYA2O00167 538 aa13.36□□□□□ -0.27
LMO3-207ENST00000439600 NR6A1Q15406 480 aa13.36□□□□□ -0.27
LMO3-207ENST00000439600 PTPRNQ16849 979 aa13.36□□□□□ -0.27
LMO3-207ENST00000439600 SP8Q8IXZ3 490 aa13.36□□□□□ -0.27
LMO3-207ENST00000439600 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
LMO3-207ENST00000439600 ANKRD2Q9GZV1 360 aa13.36□□□□□ -0.27
LMO3-207ENST00000439600 SEC31BQ9NQW1 1179 aa13.36□□□□□ -0.27
LMO3-207ENST00000439600 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
LMO3-207ENST00000439600 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
LMO3-207ENST00000439600 CHD4Q14839 1912 aa13.35□□□□□ -0.27
LMO3-207ENST00000439600 SOGA3Q5TF21 947 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms