RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PREPP48147 710 aa6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 PI16Q6UXB8 463 aa6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 CLEC10AQ8IUN9 316 aa6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 FAM20CQ8IXL6 584 aa6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 UTP4Q969X6 686 aaKnown RBP6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 FAM83CQ9BQN1 747 aa6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 BCO2Q9BYV7 579 aa6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 NLRP2Q9NX02 1062 aa6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 STOML1Q9UBI4 398 aa6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 HIF3AQ9Y2N7 669 aa6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 PNMA6FA0A0J9YX94 578 aa6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 XRCC5P13010 732 aaKnown RBP6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 FSTP19883 344 aa6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 FAAP100Q0VG06 881 aa6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 NUTM2GQ5VZR2 741 aa6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 FBF1Q8TES7 1133 aa6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 CYP4F12Q9HCS2 524 aa6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 PPP4R2Q9NY27 417 aa6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 RNF112Q9ULX5 631 aa6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 SYNGAP1Q96PV0 1343 aa6.16□□□□□ -1.42
HMGB3P12-201ENST00000438745 PDIA4P13667 645 aaKnown RBP6.15□□□□□ -1.42
HMGB3P12-201ENST00000438745 MAOBP27338 520 aa6.15□□□□□ -1.42
HMGB3P12-201ENST00000438745 POU4F3Q15319 338 aa6.15□□□□□ -1.42
HMGB3P12-201ENST00000438745 ARTNQ5T4W7 220 aa6.15□□□□□ -1.42
HMGB3P12-201ENST00000438745 FDX2Q6P4F2 183 aa6.15□□□□□ -1.42
HMGB3P12-201ENST00000438745 C12orf50Q8NA57 414 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P12-201ENST00000438745 DDX54Q8TDD1 881 aaKnown RBP6.15□□□□□ -1.42
HMGB3P12-201ENST00000438745 USP26Q9BXU7 913 aa6.15□□□□□ -1.42
HMGB3P12-201ENST00000438745 ZFP64Q9NPA5 681 aa6.15□□□□□ -1.42
HMGB3P12-201ENST00000438745 GSC2O15499 205 aa6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 SART1O43290 800 aaKnown RBP6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 ECEL1O95672 775 aa6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 IGLV1-40P01703 118 aa6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 BMP3P12645 472 aa6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 SOX4Q06945 474 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 RNF43Q68DV7 783 aa6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 NXPE4Q6UWF7 544 aa6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 TRIM42Q8IWZ5 723 aa6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 HOMEZQ8IX15 550 aa6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 GSX1Q9H4S2 264 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 C7orf69Q9H7B7 122 aa6.14□□□□□ -1.43
HMGB3P12-201ENST00000438745 HMX2A2RU54 273 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 GIPC1O14908 333 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 DRD2P14416 443 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 FCGRTP55899 365 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 NFIAQ12857 509 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 AP3B2Q13367 1082 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 COL19A1Q14993 1142 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 ALG1LQ6GMV1 187 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 DTHD1Q6ZMT9 781 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 C2CD4AQ8NCU7 369 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 C3orf58Q8NDZ4 430 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 ANKRD24Q8TF21 1146 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 EZH1Q92800 747 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 OSBPL7Q9BZF2 842 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 SRCIN1Q9C0H9 1055 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 WWC3Q9ULE0 1092 aa6.13□□□□□ -1.43
HMGB3P12-201ENST00000438745 MAPK8P45983 427 aa6.12□□□□□ -1.43
HMGB3P12-201ENST00000438745 HP1BP3Q5SSJ5 553 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P12-201ENST00000438745 BEND4Q6ZU67 534 aa6.12□□□□□ -1.43
HMGB3P12-201ENST00000438745 SND1Q7KZF4 910 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB3P12-201ENST00000438745 SETDB2Q96T68 719 aa6.12□□□□□ -1.43
HMGB3P12-201ENST00000438745 MAP4P27816 1152 aaKnown RBP6.11□□□□□ -1.43
HMGB3P12-201ENST00000438745 LRP8Q14114 963 aa6.11□□□□□ -1.43
HMGB3P12-201ENST00000438745 SGO2Q562F6 1265 aa6.11□□□□□ -1.43
HMGB3P12-201ENST00000438745 CDPF1Q6NVV7 123 aa6.11□□□□□ -1.43
HMGB3P12-201ENST00000438745 PDZD3Q86UT5 571 aa6.11□□□□□ -1.43
HMGB3P12-201ENST00000438745 ZDHHC13Q8IUH4 622 aa6.11□□□□□ -1.43
HMGB3P12-201ENST00000438745 AEBP1Q8IUX7 1158 aa6.11□□□□□ -1.43
HMGB3P12-201ENST00000438745 CORO1BQ9BR76 489 aa6.11□□□□□ -1.43
HMGB3P12-201ENST00000438745 TMEM39AQ9NV64 488 aa6.11□□□□□ -1.43
HMGB3P12-201ENST00000438745 PRR19A6NJB7 356 aa6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 HYAL3O43820 417 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 AOC2O75106 756 aa6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 P4HBP07237 508 aaKnown RBP6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 ADH5P11766 374 aa6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 ZNF157P51786 506 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 FRMD6Q96NE9 622 aa6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 DBNDD2Q9BQY9 259 aa6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 WDR18Q9BV38 432 aa6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 KRT82Q9NSB4 513 aa6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 CACNA2D2Q9NY47 1150 aa6.1□□□□□ -1.43
HMGB3P12-201ENST00000438745 GAS2O43903 313 aaKnown RBP6.09□□□□□ -1.43
HMGB3P12-201ENST00000438745 GSTT1P30711 240 aa6.09□□□□□ -1.43
HMGB3P12-201ENST00000438745 PPP2R3AQ06190 1150 aa6.09□□□□□ -1.43
HMGB3P12-201ENST00000438745 DNAJC14Q6Y2X3 702 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P12-201ENST00000438745 WDR89Q96FK6 387 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P12-201ENST00000438745 NECAB3Q96P71 396 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P12-201ENST00000438745 KCNF1Q9H3M0 494 aa6.09□□□□□ -1.43
HMGB3P12-201ENST00000438745 CCDC86Q9H6F5 360 aaKnown RBP6.09□□□□□ -1.43
HMGB3P12-201ENST00000438745 FAM95CA0A1B0GW59 222 aa6.08□□□□□ -1.44
HMGB3P12-201ENST00000438745 ZNF862O60290 1169 aa6.08□□□□□ -1.44
HMGB3P12-201ENST00000438745 MED26O95402 600 aa6.08□□□□□ -1.44
HMGB3P12-201ENST00000438745 GSTP1P09211 210 aaKnown RBP6.08□□□□□ -1.44
HMGB3P12-201ENST00000438745 CD97P48960 835 aa6.08□□□□□ -1.44
HMGB3P12-201ENST00000438745 KIF4BQ2VIQ3 1234 aa6.08□□□□□ -1.44
HMGB3P12-201ENST00000438745 SEZ6L2Q6UXD5 910 aa6.08□□□□□ -1.44
HMGB3P12-201ENST00000438745 NBPF11Q86T75 865 aa6.08□□□□□ -1.44
HMGB3P12-201ENST00000438745 STK35Q8TDR2 534 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms