RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	FGFR2	P21802	821 aa		18.77	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	SLC9C2	Q5TAH2	1124 aa		18.77	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	CCDC186	Q7Z3E2	898 aa		18.77	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	TBC1D10C	Q8IV04	446 aa		18.77	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ZNF34	Q8IZ26	560 aa		18.77	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	UBE2Q2	Q8WVN8	375 aa		18.77	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	MRPS27	Q92552	414 aa	Known RBP	18.77	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	UBN2	Q6ZU65	1347 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	TCRBV5S4A2T	A0A5A2	114 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	UQCRFS1P1	P0C7P4	283 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	IL6ST	P40189	918 aa	Predicted RBP	18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	CCDC102B	Q68D86	513 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	AK7	Q96M32	723 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	TRMT112	Q9UI30	125 aa	Known RBP	18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	SLIT2	O94813	1529 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	ZMYM6	O95789	1325 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	PHKA1	P46020	1223 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	ALX1	Q15699	326 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	OTUD7B	Q6GQQ9	843 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	KCNG4	Q8TDN1	519 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	ANO10	Q9NW15	660 aa		18.76	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	PDE6A	P16499	860 aa		18.75	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	RBM10	P98175	930 aa	Known RBP	18.75	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	MYSM1	Q5VVJ2	828 aa		18.75	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	MRFAP1L1	Q96HT8	127 aa		18.75	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	ANGEL1	Q9UNK9	670 aa	Known RBP	18.75	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	MROH5	Q6ZUA9	1318 aa		18.75	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	SH2B2	O14492	632 aa	Predicted RBP	18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	PUM3	Q15397	648 aa	Known RBP	18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	NRBP1	Q9UHY1	535 aa		18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	CLIC4	Q9Y696	253 aa		18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	NEDD4	P46934	1319 aa		18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	ZNF532	Q9HCE3	1301 aa		18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	CPLX1	O14810	134 aa		18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	KIF23	Q02241	960 aa	Predicted RBP	18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	CYB5R4	Q7L1T6	521 aa		18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	DZIP3	Q86Y13	1208 aa	Known RBP	18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	DHX40	Q8IX18	779 aa	Known RBP	18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	NKX2-3	Q8TAU0	364 aa		18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	LPIN2	Q92539	896 aa		18.74	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	KIF28P	B7ZC32	967 aa		18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	GOLGA6L19	H0YKK7	550 aa		18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	TRDN	Q13061	729 aa		18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	MTERF4	Q7Z6M4	381 aa	Known RBP	18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	STRBP	Q96SI9	672 aa	Known RBP	18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	FAM13B	Q9NYF5	915 aa		18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	DENND2A	Q9ULE3	1009 aa		18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	WNK3	Q9BYP7	1800 aa		18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	STK38	Q15208	465 aa		18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	CLIP2	Q9UDT6	1046 aa		18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	WWC3	Q9ULE0	1092 aa		18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	TBC1D2B	Q9UPU7	963 aa		18.73	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	DOCK2	Q92608	1830 aa		18.72	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	SPTLC2	O15270	562 aa		18.72	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	IDH1	O75874	414 aa	Known RBP	18.72	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	NDUFA8	P51970	172 aa		18.72	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	LRMP	Q12912	555 aa		18.72	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	TMEM87B	Q96K49	555 aa		18.72	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	POLR3D	P05423	398 aa	Predicted RBP	18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	CCDC144B	Q3MJ40	725 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	RAB11FIP4	Q86YS3	637 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	DRC7	Q8IY82	874 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	CCDC144CP	Q8IYA2	1237 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	GJB4	Q9NTQ9	266 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145		A0A1B0GVL5	298 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	EIF5	P55010	431 aa	Known RBP	18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	ANO1	Q5XXA6	986 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	APOA5	Q6Q788	366 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	SGMS1	Q86VZ5	419 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	CEP57L1	Q8IYX8	460 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	IGDCC4	Q8TDY8	1250 aa		18.71	■□□□□ 0.59
HLA-DQB2-231	ENST00000435145	TIAM2	Q8IVF5	1701 aa		18.7	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	COL16A1	Q07092	1604 aa	Predicted RBP	18.7	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	EXOC5	O00471	708 aa		18.7	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	CDKL5	O76039	1030 aa		18.7	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	CACTIN	Q8WUQ7	758 aa	Known RBP	18.7	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	BPIFA3	Q9BQP9	254 aa		18.7	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	METAP2	P50579	478 aa	Known RBP eCLIP	18.69	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	SPATA5	Q8NB90	893 aa		18.69	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	KIAA1468	Q9P260	1216 aa		18.69	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	RREB1	Q92766	1687 aa		18.69	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.69	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	CMA1	P23946	247 aa		18.69	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	SF3A1	Q15459	793 aa	Known RBP	18.69	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	NTRK3	Q16288	839 aa		18.69	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	NAT10	Q9H0A0	1025 aa	Known RBP	18.69	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.69	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	DOT1L	Q8TEK3	1739 aa		18.68	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	NID2	Q14112	1375 aa		18.68	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	RTL9	Q8NET4	1388 aa		18.68	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	BECN2	A8MW95	431 aa		18.68	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145		B4E1Z4	1266 aa		18.68	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	PATL2	C9JE40	543 aa	Known RBP	18.68	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	SLC5A1	P13866	664 aa		18.68	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	CDC27	P30260	824 aa		18.68	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	RASGRF1	Q13972	1273 aa		18.68	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	SLC39A14	Q15043	492 aa		18.68	■□□□□ 0.58
HLA-DQB2-231	ENST00000435145	SYNE3	Q6ZMZ3	975 aa		18.68	■□□□□ 0.58

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