RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 APPP05067 770 aa12.59□□□□□ -0.39
NEFM-202ENST00000433454 PRDX5P30044 214 aa12.59□□□□□ -0.39
NEFM-202ENST00000433454 TTLL5Q6EMB2 1281 aa12.59□□□□□ -0.39
NEFM-202ENST00000433454 NOL8Q76FK4 1167 aaKnown RBP12.59□□□□□ -0.39
NEFM-202ENST00000433454 NSUN4Q96CB9 384 aaKnown RBP12.59□□□□□ -0.39
NEFM-202ENST00000433454 TMX3Q96JJ7 454 aa12.59□□□□□ -0.39
NEFM-202ENST00000433454 NEK1Q96PY6 1258 aa12.59□□□□□ -0.39
NEFM-202ENST00000433454 ARMT1Q9H993 441 aa12.59□□□□□ -0.39
NEFM-202ENST00000433454 JAG2Q9Y219 1238 aa12.59□□□□□ -0.39
NEFM-202ENST00000433454 ZMYM6O95789 1325 aa12.58□□□□□ -0.39
NEFM-202ENST00000433454 LAMA4Q16363 1823 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 HMGB1P09429 215 aaKnown RBP12.58□□□□□ -0.4
NEFM-202ENST00000433454 RPS6KB1P23443 525 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 AK2P54819 239 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 MECOMQ03112 1051 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 ADGRA1Q86SQ6 560 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 LCORLQ8N3X6 602 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 MIGA1Q8NAN2 632 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 KIAA1551Q9HCM1 1747 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 KIF13BQ9NQT8 1826 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 MAGEB6P1A0A0J9YX57 407 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 ZBTB7AO95365 584 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 DZIP1Q86YF9 867 aaKnown RBP12.58□□□□□ -0.4
NEFM-202ENST00000433454 EYA3Q99504 573 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 ZC3H12CQ9C0D7 883 aaKnown RBP12.58□□□□□ -0.4
NEFM-202ENST00000433454 COA1Q9GZY4 146 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 MTFR1LQ9H019 292 aa12.58□□□□□ -0.4
NEFM-202ENST00000433454 PATL2C9JE40 543 aaKnown RBP12.57□□□□□ -0.4
NEFM-202ENST00000433454 LDHBP07195 334 aaKnown RBP12.57□□□□□ -0.4
NEFM-202ENST00000433454 ZNF384Q8TF68 577 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
NEFM-202ENST00000433454 NACAP1Q9BZK3 213 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 LIMCH1Q9UPQ0 1083 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 E7EWF7 191 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 ZNF213O14771 459 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 POLD1P28340 1107 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 ALX1Q15699 326 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 STOX1Q6ZVD7 989 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 SLC4A4Q9Y6R1 1079 aa12.57□□□□□ -0.4
NEFM-202ENST00000433454 A0A0G2JLW4 131 aa12.56□□□□□ -0.4
NEFM-202ENST00000433454 HAND2P61296 217 aa12.56□□□□□ -0.4
NEFM-202ENST00000433454 ANKRD1Q15327 319 aa12.56□□□□□ -0.4
NEFM-202ENST00000433454 CC2D2BQ6DHV5 1058 aa12.56□□□□□ -0.4
NEFM-202ENST00000433454 TBC1D22AQ8WUA7 517 aa12.56□□□□□ -0.4
NEFM-202ENST00000433454 RIOK1Q9BRS2 568 aaKnown RBP12.56□□□□□ -0.4
NEFM-202ENST00000433454 NAPBQ9H115 298 aa12.56□□□□□ -0.4
NEFM-202ENST00000433454 DDIT3P35638 169 aa12.56□□□□□ -0.4
NEFM-202ENST00000433454 IFNL3Q8IZI9 196 aa12.56□□□□□ -0.4
NEFM-202ENST00000433454 ALDH8A1Q9H2A2 487 aaPredicted RBP12.56□□□□□ -0.4
NEFM-202ENST00000433454 EPB41L4AQ9HCS5 686 aaPredicted RBP12.56□□□□□ -0.4
NEFM-202ENST00000433454 CHMP5Q9NZZ3 219 aa12.56□□□□□ -0.4
NEFM-202ENST00000433454 GSG1L2A8MUP6 293 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 TDO2P48775 406 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 GSTO1P78417 241 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 CUL4AQ13619 759 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 R3HDM1Q15032 1099 aaKnown RBP12.55□□□□□ -0.4
NEFM-202ENST00000433454 C7orf43Q8WVR3 580 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 CIZ1Q9ULV3 898 aaPredicted RBP12.55□□□□□ -0.4
NEFM-202ENST00000433454 FAM205AQ6ZU69 1335 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 G3V3G9 751 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 PRKAB2O43741 272 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 COL9A3Q14050 684 aaPredicted RBP12.55□□□□□ -0.4
NEFM-202ENST00000433454 MFSD14BQ5SR56 506 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 DCAF8Q5TAQ9 597 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
NEFM-202ENST00000433454 ZNF219Q9P2Y4 722 aaPredicted RBP12.55□□□□□ -0.4
NEFM-202ENST00000433454 DHX32Q7L7V1 743 aaKnown RBP12.54□□□□□ -0.4
NEFM-202ENST00000433454 INTS4Q96HW7 963 aaKnown RBP12.54□□□□□ -0.4
NEFM-202ENST00000433454 ZSCAN31Q96LW9 406 aaPredicted RBP12.54□□□□□ -0.4
NEFM-202ENST00000433454 TCEANC2Q96MN5 208 aa12.54□□□□□ -0.4
NEFM-202ENST00000433454 RTFDC1Q9BY42 306 aaPredicted RBP12.54□□□□□ -0.4
NEFM-202ENST00000433454 CWC22Q9HCG8 908 aaKnown RBP12.54□□□□□ -0.4
NEFM-202ENST00000433454 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
NEFM-202ENST00000433454 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
NEFM-202ENST00000433454 CHD4Q14839 1912 aa12.54□□□□□ -0.4
NEFM-202ENST00000433454 GRIPAP1Q4V328 841 aa12.54□□□□□ -0.4
NEFM-202ENST00000433454 AATFQ9NY61 560 aaKnown RBP eCLIP12.54□□□□□ -0.4
NEFM-202ENST00000433454 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
NEFM-202ENST00000433454 TIAM2Q8IVF5 1701 aa12.54□□□□□ -0.4
NEFM-202ENST00000433454 DPEP1P16444 411 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 DYNLL1P63167 89 aaKnown RBP12.53□□□□□ -0.4
NEFM-202ENST00000433454 FGD1P98174 961 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 RALYLQ86SE5 291 aaKnown RBP12.53□□□□□ -0.4
NEFM-202ENST00000433454 NCOA7Q8NI08 942 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 MYH2Q9UKX2 1941 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 LDHCP07864 332 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 GTF2IP78347 998 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 TRDNQ13061 729 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
NEFM-202ENST00000433454 DOK7Q18PE1 504 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 SDR42E1Q8WUS8 393 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
NEFM-202ENST00000433454 CRNKL1Q9BZJ0 848 aaKnown RBP12.53□□□□□ -0.4
NEFM-202ENST00000433454 NBPF3Q9H094 633 aa12.53□□□□□ -0.4
NEFM-202ENST00000433454 GOLGB1Q14789 3259 aaKnown RBP12.53□□□□□ -0.4
NEFM-202ENST00000433454 C21orf2O43822 256 aa12.52□□□□□ -0.4
NEFM-202ENST00000433454 TGFB2P61812 414 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms