RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 PRDM11Q9NQV5 511 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 KCND1Q9NSA2 647 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 COL5A2P05997 1499 aaPredicted RBP13.37□□□□□ -0.27
LINC01238-203ENST00000429456 USP27XA6NNY8 438 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 KIF28PB7ZC32 967 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 ZNF213O14771 459 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 IL2RBP14784 551 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 CEP135Q66GS9 1140 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 NYAP1Q6ZVC0 841 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
LINC01238-203ENST00000429456 CCDC112Q8NEF3 446 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 RIC1Q4ADV7 1423 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 CPLX1O14810 134 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 KIF23Q02241 960 aaPredicted RBP13.37□□□□□ -0.27
LINC01238-203ENST00000429456 IFIT5Q13325 482 aaKnown RBP13.37□□□□□ -0.27
LINC01238-203ENST00000429456 HSP90AB3PQ58FF7 597 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 PI16Q6UXB8 463 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 FILIP1Q7Z7B0 1213 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 NBPF11Q86T75 865 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
LINC01238-203ENST00000429456 FAM89AQ96GI7 184 aa13.37□□□□□ -0.27
LINC01238-203ENST00000429456 OSBPL5Q9H0X9 879 aaPredicted RBP13.37□□□□□ -0.27
LINC01238-203ENST00000429456 GSDMDP57764 484 aa13.36□□□□□ -0.27
LINC01238-203ENST00000429456 DPCR1Q3MIW9 517 aa13.36□□□□□ -0.27
LINC01238-203ENST00000429456 AXDND1Q5T1B0 1012 aaPredicted RBP13.36□□□□□ -0.27
LINC01238-203ENST00000429456 ANO1Q5XXA6 986 aa13.36□□□□□ -0.27
LINC01238-203ENST00000429456 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
LINC01238-203ENST00000429456 CCDC85AQ96PX6 553 aaPredicted RBP13.36□□□□□ -0.27
LINC01238-203ENST00000429456 CARD10Q9BWT7 1032 aa13.36□□□□□ -0.27
LINC01238-203ENST00000429456 NBPF3Q9H094 633 aa13.36□□□□□ -0.27
LINC01238-203ENST00000429456 GJB4Q9NTQ9 266 aa13.36□□□□□ -0.27
LINC01238-203ENST00000429456 IMPACTQ9P2X3 320 aa13.36□□□□□ -0.27
LINC01238-203ENST00000429456 RIPOR2Q9Y4F9 1068 aa13.36□□□□□ -0.27
LINC01238-203ENST00000429456 TOGARAM1Q9Y4F4 1720 aa13.36□□□□□ -0.27
LINC01238-203ENST00000429456 ZNF202O95125 648 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 CMA1P23946 247 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 MCAMP43121 646 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 RAB11FIP4Q86YS3 637 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 ZNF512BQ96KM6 892 aaPredicted RBP13.35□□□□□ -0.27
LINC01238-203ENST00000429456 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC01238-203ENST00000429456 PRDM4Q9UKN5 801 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 ATRNO75882 1429 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
LINC01238-203ENST00000429456 SLC3A2P08195 630 aaKnown RBP13.35□□□□□ -0.27
LINC01238-203ENST00000429456 ADD2P35612 726 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 NLRP12P59046 1061 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 CBX1P83916 185 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 PTPN14Q15678 1187 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 KIF6Q6ZMV9 814 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 ZMYM6O95789 1325 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 CDHR2Q9BYE9 1310 aa13.35□□□□□ -0.27
LINC01238-203ENST00000429456 ZRSR1Q15695 479 aaKnown RBP13.34□□□□□ -0.27
LINC01238-203ENST00000429456 METTL24Q5JXM2 366 aa13.34□□□□□ -0.27
LINC01238-203ENST00000429456 CCAR2Q8N163 923 aaKnown RBP13.34□□□□□ -0.27
LINC01238-203ENST00000429456 WDHD1O75717 1129 aaPredicted RBP13.34□□□□□ -0.27
LINC01238-203ENST00000429456 PFKFB1P16118 471 aa13.34□□□□□ -0.27
LINC01238-203ENST00000429456 U2AF2P26368 475 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC01238-203ENST00000429456 SLC39A14Q15043 492 aa13.34□□□□□ -0.27
LINC01238-203ENST00000429456 TEX13AQ9BXU3 409 aaPredicted RBP13.34□□□□□ -0.27
LINC01238-203ENST00000429456 ANGEL1Q9UNK9 670 aaKnown RBP13.34□□□□□ -0.27
LINC01238-203ENST00000429456 ZNF330Q9Y3S2 320 aaPredicted RBP13.34□□□□□ -0.27
LINC01238-203ENST00000429456 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.28
LINC01238-203ENST00000429456 TRDNQ13061 729 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 NCAPHQ15003 741 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 BRINP3Q76B58 766 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 CYB5R4Q7L1T6 521 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 TBC1D10CQ8IV04 446 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 DNAJC10Q8IXB1 793 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 ZNF592Q92610 1267 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 TIGD1Q96MW7 591 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 XPO4Q9C0E2 1151 aaKnown RBP13.33□□□□□ -0.28
LINC01238-203ENST00000429456 PRDM10Q9NQV6 1147 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 DENND2AQ9ULE3 1009 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.28
LINC01238-203ENST00000429456 MROH7-TTC4A0A0A0MT08 1334 aa13.33□□□□□ -0.28
LINC01238-203ENST00000429456 ZSCAN20P17040 1043 aaPredicted RBP13.32□□□□□ -0.28
LINC01238-203ENST00000429456 ITGA6P23229 1130 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 TTF1Q15361 905 aaPredicted RBP13.32□□□□□ -0.28
LINC01238-203ENST00000429456 UBE3CQ15386 1083 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 GIGYF2Q6Y7W6 1299 aaKnown RBP13.32□□□□□ -0.28
LINC01238-203ENST00000429456 LDHAL6AQ6ZMR3 332 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 SYNE4Q8N205 404 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 VGLL2Q8N8G2 317 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 FEZ1Q99689 392 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 ALG1Q9BT22 464 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 MAP3K15Q6ZN16 1313 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 METAP2P50579 478 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC01238-203ENST00000429456 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
LINC01238-203ENST00000429456 SLC9C2Q5TAH2 1124 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 CCDC150Q8NCX0 1101 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 AIFM3Q96NN9 605 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 GREM2Q9H772 168 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 PIH1D3Q9NQM4 214 aaKnown RBP13.32□□□□□ -0.28
LINC01238-203ENST00000429456 TRMT1Q9NXH9 659 aaKnown RBP13.32□□□□□ -0.28
LINC01238-203ENST00000429456 IFNKQ9P0W0 207 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 CGNQ9P2M7 1197 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms