RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CRCPO75575 148 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 CALML3P27482 149 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 ANKRD44Q8N8A2 993 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 RBM17Q96I25 401 aaKnown RBP10.1□□□□□ -0.79
CTNND1-208ENST00000428599 ZBTB16Q05516 673 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 RNF34Q969K3 372 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 TFIP11Q9UBB9 837 aaKnown RBP10.1□□□□□ -0.79
CTNND1-208ENST00000428599 CCNL1Q9UK58 526 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-208ENST00000428599 ZBTB21Q9ULJ3 1066 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 IL13P35225 146 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 FMNL3Q8IVF7 1028 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 IL27Q8NEV9 243 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 NOL3O60936 208 aaKnown RBP10.1□□□□□ -0.79
CTNND1-208ENST00000428599 TACC1O75410 805 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 NUCB1Q02818 461 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 HDAC1Q13547 482 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-208ENST00000428599 CFAP157Q5JU67 520 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 ISM2Q6H9L7 571 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 DYNC1I1O14576 645 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 ZNF790Q6PG37 636 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 KCNG4Q8TDN1 519 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 BICDL2A1A5D9 508 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 HSPA4P34932 840 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 GNG11P61952 73 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 KMT5BQ4FZB7 885 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 ATP6V0A2Q9Y487 856 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 GJA3Q9Y6H8 435 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 IVNS1ABPQ9Y6Y0 642 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 GABPB2Q8TAK5 448 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-208ENST00000428599 NSFL1CQ9UNZ2 370 aaKnown RBP10.09□□□□□ -0.79
CTNND1-208ENST00000428599 AKNAD1Q5T1N1 836 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 HELBQ8NG08 1087 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-208ENST00000428599 JAKMIP2Q96AA8 810 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 PFDN4Q9NQP4 134 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 STK32BQ9NY57 414 aa10.09□□□□□ -0.79
CTNND1-208ENST00000428599 GNA11P29992 359 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 WDR44Q5JSH3 913 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 USP21Q9UK80 565 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 PCDHB15Q9Y5E8 787 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 PER1O15534 1290 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-208ENST00000428599 HOOK2Q96ED9 719 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 C16orf45Q96MC5 204 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-208ENST00000428599 NAP1L3Q99457 506 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-208ENST00000428599 HAUS2Q9NVX0 235 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 ZCCHC11Q5TAX3 1644 aaKnown RBP10.08□□□□□ -0.8
CTNND1-208ENST00000428599 RIMBP2O15034 1052 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 UBASH3AP57075 661 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 SP4Q02446 784 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 DDX21Q9NR30 783 aaKnown RBP eCLIP10.08□□□□□ -0.84e-6■□□□□ 11.2
CTNND1-208ENST00000428599 ZNF165P49910 485 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 USP25Q9UHP3 1055 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 SAMD9LQ8IVG5 1584 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 CTAGE15A4D2H0 777 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 CTAGE8P0CG41 777 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 PDE1AP54750 535 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 RASA3Q14644 834 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 CTAGE6Q86UF2 777 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 CTAGE4Q8IX94 777 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 KIFC2Q96AC6 838 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 MCM9Q9NXL9 1143 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 TNNQ9UQP3 1299 aa10.08□□□□□ -0.8
CTNND1-208ENST00000428599 NOC2LQ9Y3T9 749 aaKnown RBP10.08□□□□□ -0.8
CTNND1-208ENST00000428599 STX10O60499 249 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 LDHBP07195 334 aaKnown RBP10.07□□□□□ -0.8
CTNND1-208ENST00000428599 SDSP20132 328 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 KRT83P78385 493 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 KIF5AQ12840 1032 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 FNBP1Q96RU3 617 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 TTC37Q6PGP7 1564 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 KRT2P35908 639 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 SLC9C2Q5TAH2 1124 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 ANKS4BQ8N8V4 417 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 NEK11Q8NG66 645 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 CACYBPQ9HB71 228 aaKnown RBP10.07□□□□□ -0.8
CTNND1-208ENST00000428599 LGR6Q9HBX8 967 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 CALCOCO1Q9P1Z2 691 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 PRIM1P49642 420 aaKnown RBP10.07□□□□□ -0.8
CTNND1-208ENST00000428599 TTC6Q86TZ1 520 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 CCDC110Q8TBZ0 833 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 BRF1Q92994 677 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 ZNF408Q9H9D4 720 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 RPL13P26373 211 aaKnown RBP10.07□□□□□ -0.8
CTNND1-208ENST00000428599 CCDC129Q6ZRS4 1044 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 NACA2Q9H009 215 aa10.07□□□□□ -0.8
CTNND1-208ENST00000428599 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 RIOK3O14730 519 aaKnown RBP10.06□□□□□ -0.8
CTNND1-208ENST00000428599 OPA1O60313 960 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 UBE2HP62256 183 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 GEN1Q17RS7 908 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 PROCA1Q8NCQ7 364 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-208ENST00000428599 KIFAP3Q92845 792 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 TRIM7Q9C029 511 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 BICC1Q9H694 974 aaKnown RBP10.06□□□□□ -0.8
CTNND1-208ENST00000428599 SLC52A2Q9HAB3 445 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 EFCAB6Q5THR3 1501 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 TRIM75PA6NK02 468 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 ATP2C2O75185 946 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 ARID5AQ03989 594 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms