RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 ALS2Q96Q42 1657 aa16.48■□□□□ 0.23
TPM3P9-201ENST00000424846 FANCGO15287 622 aa16.48■□□□□ 0.23
TPM3P9-201ENST00000424846 ANO1Q5XXA6 986 aa16.48■□□□□ 0.23
TPM3P9-201ENST00000424846 CEP126Q9P2H0 1117 aa16.48■□□□□ 0.23
TPM3P9-201ENST00000424846 MORC2Q9Y6X9 1032 aaPredicted RBP16.48■□□□□ 0.23
TPM3P9-201ENST00000424846 IMMTQ16891 758 aaKnown RBP16.47■□□□□ 0.23
TPM3P9-201ENST00000424846 ERCC6LQ2NKX8 1250 aa16.47■□□□□ 0.23
TPM3P9-201ENST00000424846 TTC39AQ5SRH9 613 aa16.47■□□□□ 0.23
TPM3P9-201ENST00000424846 GORABQ5T7V8 394 aa16.47■□□□□ 0.23
TPM3P9-201ENST00000424846 YEATS4O95619 227 aa16.47■□□□□ 0.23
TPM3P9-201ENST00000424846 KCNG4Q8TDN1 519 aa16.47■□□□□ 0.23
TPM3P9-201ENST00000424846 PHKBQ93100 1093 aa16.47■□□□□ 0.23
TPM3P9-201ENST00000424846 FAM89AQ96GI7 184 aa16.47■□□□□ 0.23
TPM3P9-201ENST00000424846 CLIC6Q96NY7 704 aa16.47■□□□□ 0.23
TPM3P9-201ENST00000424846 NLRP12P59046 1061 aa16.46■□□□□ 0.23
TPM3P9-201ENST00000424846 HSP90AA4PQ58FG1 418 aa16.46■□□□□ 0.23
TPM3P9-201ENST00000424846 CYB5R4Q7L1T6 521 aa16.46■□□□□ 0.23
TPM3P9-201ENST00000424846 ZNF397Q8NF99 534 aaPredicted RBP16.46■□□□□ 0.23
TPM3P9-201ENST00000424846 KIF1AQ12756 1690 aa16.46■□□□□ 0.23
TPM3P9-201ENST00000424846 CPLX1O14810 134 aa16.46■□□□□ 0.23
TPM3P9-201ENST00000424846 GPAA1O43292 621 aa16.46■□□□□ 0.23
TPM3P9-201ENST00000424846 GSDMDP57764 484 aa16.46■□□□□ 0.23
TPM3P9-201ENST00000424846 NUP188Q5SRE5 1749 aa16.46■□□□□ 0.23
TPM3P9-201ENST00000424846 SLU7O95391 586 aaKnown RBP16.46■□□□□ 0.22
TPM3P9-201ENST00000424846 SLFN14P0C7P3 912 aa16.46■□□□□ 0.22
TPM3P9-201ENST00000424846 FANCCQ00597 558 aa16.46■□□□□ 0.22
TPM3P9-201ENST00000424846 PNOCQ13519 176 aa16.46■□□□□ 0.22
TPM3P9-201ENST00000424846 TBC1D10CQ8IV04 446 aa16.46■□□□□ 0.22
TPM3P9-201ENST00000424846 FBXL16Q8N461 479 aa16.46■□□□□ 0.22
TPM3P9-201ENST00000424846 ERO1AQ96HE7 468 aa16.46■□□□□ 0.22
TPM3P9-201ENST00000424846 TMEM232C9JQI7 657 aa16.45■□□□□ 0.22
TPM3P9-201ENST00000424846 CDC27P30260 824 aa16.45■□□□□ 0.22
TPM3P9-201ENST00000424846 ZRSR1Q15695 479 aaKnown RBP16.45■□□□□ 0.22
TPM3P9-201ENST00000424846 SHC4Q6S5L8 630 aa16.45■□□□□ 0.22
TPM3P9-201ENST00000424846 SYNE3Q6ZMZ3 975 aa16.45■□□□□ 0.22
TPM3P9-201ENST00000424846 CCDC191Q8NCU4 936 aa16.45■□□□□ 0.22
TPM3P9-201ENST00000424846 MYL10Q9BUA6 226 aa16.45■□□□□ 0.22
TPM3P9-201ENST00000424846 SFPQP23246 707 aaKnown RBP eCLIP16.45■□□□□ 0.22
TPM3P9-201ENST00000424846 FOXN1O15353 648 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 FOXP4Q8IVH2 680 aaPredicted RBP16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 BPIFA3Q9BQP9 254 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 KCND1Q9NSA2 647 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 IMPACTQ9P2X3 320 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 LAMB4A4D0S4 1761 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 ZNF213O14771 459 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 CIAO1O76071 339 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 CMA1P23946 247 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 SPECC1Q5M775 1068 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 ZNF771Q7L3S4 317 aaPredicted RBP16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 VPS37DQ86XT2 251 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 NCOA7Q8NI08 942 aa16.44■□□□□ 0.22
TPM3P9-201ENST00000424846 TMEM94Q12767 1356 aa16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 MCAMP43121 646 aa16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 RALYLQ86SE5 291 aaKnown RBP16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 APPBP2Q92624 585 aa16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 MYO5AQ9Y4I1 1855 aaKnown RBP16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 SLC39A14Q15043 492 aa16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 BRAPQ7Z569 592 aa16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 ALG1Q9BT22 464 aa16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 L2HGDHQ9H9P8 463 aa16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 C4AP0C0L4 1744 aa16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 C4BP0C0L5 1744 aa16.43■□□□□ 0.22
TPM3P9-201ENST00000424846 KIF20AO95235 890 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 CCDC93Q567U6 631 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 C19orf44Q9H6X5 657 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 SYKP43405 635 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 PDE4BQ07343 736 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 PTPAQ15257 358 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 KRT40Q6A162 431 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 MICU3Q86XE3 530 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 BMP6P22004 513 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 STK11IPQ8N1F8 1099 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 CCDC150Q8NCX0 1101 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 FAM53CQ9NYF3 392 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
TPM3P9-201ENST00000424846 B4E1Z4 1266 aa16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 LONRF3Q496Y0 759 aa16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 METTL16Q86W50 562 aaKnown RBP16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 INTS13Q9NVM9 706 aa16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 DNAI1Q9UI46 699 aa16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 DDX60Q8IY21 1712 aaKnown RBP16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 ADAMTSL3P82987 1691 aa16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 RANBP6O60518 1105 aaKnown RBP16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 GRIN1Q05586 938 aa16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 ISCA1Q9BUE6 129 aa16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 EPC1Q9H2F5 836 aa16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 HPSEQ9Y251 543 aa16.41■□□□□ 0.22
TPM3P9-201ENST00000424846 DHX16O60231 1041 aaKnown RBP16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 KRT222Q8N1A0 295 aa16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 MAP3K14Q99558 947 aa16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 TMX1Q9H3N1 280 aa16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 PIH1D3Q9NQM4 214 aaKnown RBP16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 FANCLQ9NW38 375 aa16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 TUBE1Q9UJT0 475 aa16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 TACC3Q9Y6A5 838 aa16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 CPDO75976 1380 aa16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms