RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CEP135Q66GS9 1140 aa18.38■□□□□ 0.53
CDH1-202ENST00000422392 SHANK3Q9BYB0 1731 aa18.38■□□□□ 0.53
CDH1-202ENST00000422392 DDX60Q8IY21 1712 aaKnown RBP18.38■□□□□ 0.53
CDH1-202ENST00000422392 GREM2Q9H772 168 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 C4BP0C0L5 1744 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 PLEKHG2Q9H7P9 1386 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 HLFQ16534 295 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 LRRFIP1Q32MZ4 808 aaKnown RBP18.37■□□□□ 0.53
CDH1-202ENST00000422392 LDHAL6AQ6ZMR3 332 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 CYB5R4Q7L1T6 521 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 TBC1D10CQ8IV04 446 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 CCDC112Q8NEF3 446 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 POLR3EQ9NVU0 708 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 RIC1Q4ADV7 1423 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 MROH7-TTC4A0A0A0MT08 1334 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 A0A1W2PQ27 194 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 A0A1W2PQ64 194 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 A0A1W2PQD8 194 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 ZNF202O95125 648 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 KIF23Q02241 960 aaPredicted RBP18.37■□□□□ 0.53
CDH1-202ENST00000422392 SLC9C2Q5TAH2 1124 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 SYNE3Q6ZMZ3 975 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 TICAM2Q86XR7 235 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 KCNG4Q8TDN1 519 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 INCENPQ9NQS7 918 aa18.37■□□□□ 0.53
CDH1-202ENST00000422392 COL5A2P05997 1499 aaPredicted RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 DHX16O60231 1041 aaKnown RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 WDHD1O75717 1129 aaPredicted RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 APPP05067 770 aa18.36■□□□□ 0.53
CDH1-202ENST00000422392 RBM6P78332 1123 aaKnown RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 NKX1-1Q15270 411 aaPredicted RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 SMAP1Q8IYB5 467 aaPredicted RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 PHKBQ93100 1093 aa18.36■□□□□ 0.53
CDH1-202ENST00000422392 NAT10Q9H0A0 1025 aaKnown RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 TOGARAM1Q9Y4F4 1720 aa18.36■□□□□ 0.53
CDH1-202ENST00000422392 UBE2Q2LH0YL09 131 aa18.36■□□□□ 0.53
CDH1-202ENST00000422392 IDH1O75874 414 aaKnown RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 YEATS4O95619 227 aa18.36■□□□□ 0.53
CDH1-202ENST00000422392 PCCAP05165 728 aaPredicted RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 ITGA6P23229 1130 aa18.36■□□□□ 0.53
CDH1-202ENST00000422392 ZRSR1Q15695 479 aaKnown RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
CDH1-202ENST00000422392 BRINP3Q76B58 766 aa18.36■□□□□ 0.53
CDH1-202ENST00000422392 XPO4Q9C0E2 1151 aaKnown RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 TMOD3Q9NYL9 352 aa18.36■□□□□ 0.53
CDH1-202ENST00000422392 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDH1-202ENST00000422392 V9GYY5 206 aaPredicted RBP18.36■□□□□ 0.53
CDH1-202ENST00000422392 SMC2O95347 1197 aa18.35■□□□□ 0.53
CDH1-202ENST00000422392 CSF1RP07333 972 aa18.35■□□□□ 0.53
CDH1-202ENST00000422392 PFKFB1P16118 471 aa18.35■□□□□ 0.53
CDH1-202ENST00000422392 DCCP43146 1447 aa18.35■□□□□ 0.53
CDH1-202ENST00000422392 AXDND1Q5T1B0 1012 aaPredicted RBP18.35■□□□□ 0.53
CDH1-202ENST00000422392 KIF6Q6ZMV9 814 aa18.35■□□□□ 0.53
CDH1-202ENST00000422392 ZBTB38Q8NAP3 1195 aaPredicted RBP18.35■□□□□ 0.53
CDH1-202ENST00000422392 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
CDH1-202ENST00000422392 IFNKQ9P0W0 207 aa18.35■□□□□ 0.53
CDH1-202ENST00000422392 RIPOR2Q9Y4F9 1068 aa18.35■□□□□ 0.53
CDH1-202ENST00000422392 TNS2Q63HR2 1409 aa18.35■□□□□ 0.53
CDH1-202ENST00000422392 SLC3A2P08195 630 aaKnown RBP18.35■□□□□ 0.53
CDH1-202ENST00000422392 MYL10Q9BUA6 226 aa18.35■□□□□ 0.53
CDH1-202ENST00000422392 B4E1Z4 1266 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 PTPN14Q15678 1187 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 BRAPQ7Z569 592 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 MICU3Q86XE3 530 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 PIH1D3Q9NQM4 214 aaKnown RBP18.34■□□□□ 0.53
CDH1-202ENST00000422392 CNNM1Q9NRU3 951 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 PRDM4Q9UKN5 801 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 PAXBP1Q9Y5B6 917 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 CDC27P30260 824 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 NYAP1Q6ZVC0 841 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 TTLL11Q8NHH1 800 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 CHMP4CQ96CF2 233 aa18.34■□□□□ 0.53
CDH1-202ENST00000422392 NEMFO60524 1076 aa18.33■□□□□ 0.52
CDH1-202ENST00000422392 ADD2P35612 726 aa18.33■□□□□ 0.52
CDH1-202ENST00000422392 TRDNQ13061 729 aa18.33■□□□□ 0.52
CDH1-202ENST00000422392 TMC6Q7Z403 805 aa18.33■□□□□ 0.52
CDH1-202ENST00000422392 ALG1Q9BT22 464 aa18.33■□□□□ 0.52
CDH1-202ENST00000422392 ECM29Q5VYK3 1845 aa18.33■□□□□ 0.52
CDH1-202ENST00000422392 ZSCAN20P17040 1043 aaPredicted RBP18.33■□□□□ 0.52
CDH1-202ENST00000422392 METAP2P50579 478 aaKnown RBP eCLIP18.33■□□□□ 0.52
CDH1-202ENST00000422392 CCAR2Q8N163 923 aaKnown RBP18.33■□□□□ 0.52
CDH1-202ENST00000422392 HELBQ8NG08 1087 aaPredicted RBP18.33■□□□□ 0.52
CDH1-202ENST00000422392 ANGEL1Q9UNK9 670 aaKnown RBP18.33■□□□□ 0.52
CDH1-202ENST00000422392 LMOD1P29536 600 aaPredicted RBP18.32■□□□□ 0.52
CDH1-202ENST00000422392 PHKA1P46020 1223 aa18.32■□□□□ 0.52
CDH1-202ENST00000422392 VPS37DQ86XT2 251 aa18.32■□□□□ 0.52
CDH1-202ENST00000422392 PIGBQ92521 554 aa18.32■□□□□ 0.52
CDH1-202ENST00000422392 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.32■□□□□ 0.52
CDH1-202ENST00000422392 WWC3Q9ULE0 1092 aa18.32■□□□□ 0.52
CDH1-202ENST00000422392 ZNF532Q9HCE3 1301 aa18.32■□□□□ 0.52
CDH1-202ENST00000422392 MYH3P11055 1940 aa18.32■□□□□ 0.52
CDH1-202ENST00000422392 PTPN21Q16825 1174 aa18.32■□□□□ 0.52
CDH1-202ENST00000422392 FBXO3Q9UK99 471 aa18.32■□□□□ 0.52
CDH1-202ENST00000422392 SNAP23O00161 211 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 ATP1A3P13637 1013 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 TRIM28Q13263 835 aaKnown RBP18.31■□□□□ 0.52
CDH1-202ENST00000422392 NCAPHQ15003 741 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 KRT40Q6A162 431 aa18.31■□□□□ 0.52
CDH1-202ENST00000422392 ARMCX5Q6P1M9 558 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms