RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 FAM237AA0A1B0GTK4 181 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 CPLX1O14810 134 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 ANKLE2Q86XL3 938 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 HSD3B7Q9H2F3 369 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 GPHNQ9NQX3 736 aaPredicted RBP20.38■□□□□ 0.85
SDCBP-202ENST00000413219 RGPD5Q99666 1765 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 A0A1B0GUL7 405 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 PPP6R2O75170 966 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 TPM1P09493 284 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 LMOD1P29536 600 aaPredicted RBP20.38■□□□□ 0.85
SDCBP-202ENST00000413219 MYL5Q02045 173 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 ORAI2Q96SN7 254 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 CWC25Q9NXE8 425 aaPredicted RBP20.38■□□□□ 0.85
SDCBP-202ENST00000413219 HPSEQ9Y251 543 aa20.38■□□□□ 0.85
SDCBP-202ENST00000413219 NWD2Q9ULI1 1742 aa20.37■□□□□ 0.85
SDCBP-202ENST00000413219 KIF28PB7ZC32 967 aa20.37■□□□□ 0.85
SDCBP-202ENST00000413219 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
SDCBP-202ENST00000413219 ARHGAP29Q52LW3 1261 aa20.37■□□□□ 0.85
SDCBP-202ENST00000413219 TRIM65Q6PJ69 517 aa20.37■□□□□ 0.85
SDCBP-202ENST00000413219 JMYQ8N9B5 988 aa20.37■□□□□ 0.85
SDCBP-202ENST00000413219 NCOA7Q8NI08 942 aa20.37■□□□□ 0.85
SDCBP-202ENST00000413219 GLI3P10071 1580 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 MEGF6O75095 1541 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 MROH7-TTC4A0A0A0MT08 1334 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 FOXP2O15409 715 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 SYKP43405 635 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 UBASH3AP57075 661 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 LMOD2Q6P5Q4 547 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 UBXN4Q92575 508 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 RBM33Q96EV2 1170 aaKnown RBP20.36■□□□□ 0.85
SDCBP-202ENST00000413219 NOL10Q9BSC4 688 aaKnown RBP20.36■□□□□ 0.85
SDCBP-202ENST00000413219 NPHP1O15259 732 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 ATP8B1O43520 1251 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 ZRANB2O95218 330 aaKnown RBP eCLIP20.36■□□□□ 0.85
SDCBP-202ENST00000413219 PNMA6AP0CW24 399 aaPredicted RBP20.36■□□□□ 0.85
SDCBP-202ENST00000413219 LRRN4CLQ8ND94 238 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 NLRP2Q9NX02 1062 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 DNAI1Q9UI46 699 aa20.36■□□□□ 0.85
SDCBP-202ENST00000413219 CPDO75976 1380 aa20.35■□□□□ 0.85
SDCBP-202ENST00000413219 ABCC12Q96J65 1359 aa20.35■□□□□ 0.85
SDCBP-202ENST00000413219 ZSCAN12O43309 604 aa20.35■□□□□ 0.85
SDCBP-202ENST00000413219 WDHD1O75717 1129 aaPredicted RBP20.35■□□□□ 0.85
SDCBP-202ENST00000413219 ANTXR2P58335 489 aa20.35■□□□□ 0.85
SDCBP-202ENST00000413219 VSTM4Q8IW00 320 aa20.35■□□□□ 0.85
SDCBP-202ENST00000413219 TJP1Q07157 1748 aa20.35■□□□□ 0.85
SDCBP-202ENST00000413219 EFCAB8A8MWE9 144 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 FGAP02671 866 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 ATP1A3P13637 1013 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 LRRC24Q50LG9 513 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 RALYLQ86SE5 291 aaKnown RBP20.34■□□□□ 0.85
SDCBP-202ENST00000413219 REXO1L1PQ8IX06 675 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 TADA3O75528 432 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 CCDC158Q5M9N0 1113 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 TMCO3Q6UWJ1 677 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 KRT28Q7Z3Y7 464 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 MNS1Q8NEH6 495 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 CALCOCO1Q9P1Z2 691 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 FBXO3Q9UK99 471 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 C4AP0C0L4 1744 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 C4BP0C0L5 1744 aa20.34■□□□□ 0.85
SDCBP-202ENST00000413219 GOLGA6L9A6NEM1 432 aa20.33■□□□□ 0.85
SDCBP-202ENST00000413219 SERPINC1P01008 464 aa20.33■□□□□ 0.85
SDCBP-202ENST00000413219 ELOA2Q8IYF1 753 aaPredicted RBP20.33■□□□□ 0.85
SDCBP-202ENST00000413219 CCDC191Q8NCU4 936 aa20.33■□□□□ 0.85
SDCBP-202ENST00000413219 APPBP2Q92624 585 aa20.33■□□□□ 0.85
SDCBP-202ENST00000413219 CEP126Q9P2H0 1117 aa20.33■□□□□ 0.85
SDCBP-202ENST00000413219 ZMYM6O95789 1325 aa20.33■□□□□ 0.84
SDCBP-202ENST00000413219 ARHGAP6O43182 974 aa20.33■□□□□ 0.84
SDCBP-202ENST00000413219 CDKL5O76039 1030 aa20.33■□□□□ 0.84
SDCBP-202ENST00000413219 HAND2P61296 217 aa20.33■□□□□ 0.84
SDCBP-202ENST00000413219 MPHOSPH8Q99549 860 aa20.33■□□□□ 0.84
SDCBP-202ENST00000413219 NUP188Q5SRE5 1749 aa20.32■□□□□ 0.84
SDCBP-202ENST00000413219 TOP1P11387 765 aaKnown RBP20.32■□□□□ 0.84
SDCBP-202ENST00000413219 CYP2C19P33261 490 aa20.32■□□□□ 0.84
SDCBP-202ENST00000413219 PLA2G4AP47712 749 aa20.32■□□□□ 0.84
SDCBP-202ENST00000413219 WASHC4Q2M389 1173 aa20.32■□□□□ 0.84
SDCBP-202ENST00000413219 RESP18Q5W5W9 173 aa20.32■□□□□ 0.84
SDCBP-202ENST00000413219 OLFM4Q6UX06 510 aa20.32■□□□□ 0.84
SDCBP-202ENST00000413219 ST7Q9NRC1 585 aa20.32■□□□□ 0.84
SDCBP-202ENST00000413219 AKAP2Q9Y2D5 859 aa20.32■□□□□ 0.84
SDCBP-202ENST00000413219 PTPAQ15257 358 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 CFAP100Q494V2 611 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 TTC39AQ5SRH9 613 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 DPF2Q92785 391 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
SDCBP-202ENST00000413219 PARP3Q9Y6F1 533 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 PKD1L3Q7Z443 1732 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 ZNF213O14771 459 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 CYP27B1O15528 508 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 MARCKSP29966 332 aaPredicted RBP20.31■□□□□ 0.84
SDCBP-202ENST00000413219 CABP4P57796 275 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 FKBP4Q02790 459 aaKnown RBP eCLIP20.31■□□□□ 0.84
SDCBP-202ENST00000413219 SHC4Q6S5L8 630 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.31■□□□□ 0.84
SDCBP-202ENST00000413219 GJB4Q9NTQ9 266 aa20.31■□□□□ 0.84
SDCBP-202ENST00000413219 MAP3K15Q6ZN16 1313 aa20.3■□□□□ 0.84
SDCBP-202ENST00000413219 NBPF26B4DH59 902 aa20.3■□□□□ 0.84
SDCBP-202ENST00000413219 CUTAO60888 179 aa20.3■□□□□ 0.84
SDCBP-202ENST00000413219 NBPF14Q5TI25 921 aa20.3■□□□□ 0.84
SDCBP-202ENST00000413219 NBPF10Q6P3W6 841 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms