RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 GOLGA8FQ08AF8 430 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 GOLGA8DPQ0D2H9 430 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 MAP3K12Q12852 859 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 TJAP1Q5JTD0 557 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 MAP1SQ66K74 1059 aaPredicted RBP3.81□□□□□ -1.8
RGPD3-202ENST00000409886 TTC6Q86TZ1 520 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 SPC24Q8NBT2 197 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 MYCNP04198 464 aaPredicted RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 ATP6V1AP38606 617 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 NOLC1Q14978 699 aaKnown RBP eCLIP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 FERMT3Q86UX7 667 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 DHX37Q8IY37 1157 aaKnown RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 C2orf69Q8N8R5 385 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 MASTLQ96GX5 879 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 HSD3B7Q9H2F3 369 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 NARFQ9UHQ1 456 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 COL15A1P39059 1388 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 URB1O60287 2271 aaKnown RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 CTIFO43310 598 aaKnown RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 HSP90AB1P08238 724 aaKnown RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 PTGS1P23219 599 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 PLA2G4AP47712 749 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 ANKRD45Q5TZF3 282 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 ZNF296Q8WUU4 475 aaPredicted RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 C16orf45Q96MC5 204 aaPredicted RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 DENND2AQ9ULE3 1009 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 LTBP2Q14767 1821 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 GTF2F1P35269 517 aaKnown RBP eCLIP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 MMP14P50281 582 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 HNRNPH2P55795 449 aaKnown RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 NEK11Q8NG66 645 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 PIGBQ92521 554 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 FEZ2Q9UHY8 353 aaPredicted RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 EVC2Q86UK5 1308 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 POTEFA5A3E0 1075 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 BRD1O95696 1058 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 FAM163BP0C2L3 166 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 KCNQ4P56696 695 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 PPARDQ03181 441 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 SPRED3Q2MJR0 410 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 CT47A1Q5JQC4 288 aaPredicted RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 BICDL1Q6ZP65 573 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 TMX3Q96JJ7 454 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 HINFPQ9BQA5 517 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 SPG7Q9UQ90 795 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 MYH7P12883 1935 aa3.8□□□□□ -1.8
RGPD3-202ENST00000409886 RPAP1Q9BWH6 1393 aaPredicted RBP3.8□□□□□ -1.8
RGPD3-202ENST00000409886 FYB1O15117 783 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 GNAI3P08754 354 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 TMPOP42166 694 aaKnown RBP3.79□□□□□ -1.8
RGPD3-202ENST00000409886 CHD1LQ86WJ1 897 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 SPIRE2Q8WWL2 714 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 CSRNP1Q96S65 589 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 TMOD3Q9NYL9 352 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 CNPY2Q9Y2B0 182 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 COL4A5P29400 1685 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 ERICH4A6NGS2 130 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 KCNJ4P48050 445 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 TERF2Q15554 542 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 DDX11Q96FC9 970 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 FAM186AA6NE01 2351 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 MYH8P13535 1937 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 ECM2O94769 699 aaPredicted RBP3.79□□□□□ -1.8
RGPD3-202ENST00000409886 ANXA1P04083 346 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 SCNN1DP51172 638 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 SLC39A6Q13433 755 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 NBPF11Q86T75 865 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 SMAP1Q8IYB5 467 aaPredicted RBP3.79□□□□□ -1.8
RGPD3-202ENST00000409886 GBA2Q9HCG7 927 aaPredicted RBP3.79□□□□□ -1.8
RGPD3-202ENST00000409886 SKOR2Q2VWA4 1001 aaPredicted RBP3.79□□□□□ -1.8
RGPD3-202ENST00000409886 WWC2Q6AWC2 1192 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 SNX21Q969T3 373 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 CCDC94Q9BW85 323 aaPredicted RBP3.79□□□□□ -1.8
RGPD3-202ENST00000409886 SRCIN1Q9C0H9 1055 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 SPTLC3Q9NUV7 552 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 SPEF2Q9C093 1822 aa3.79□□□□□ -1.8
RGPD3-202ENST00000409886 K7ELQ4 463 aaPredicted RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 ERCC6LQ2NKX8 1250 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 DEFB123Q8N688 67 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 RAPGEF4Q8WZA2 1011 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 GPRC5DQ9NZD1 345 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 DDX41Q9UJV9 622 aaKnown RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 ARAP2Q8WZ64 1704 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 N4BP1O75113 896 aaKnown RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 NPR1P16066 1061 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 HOXC9P31274 260 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 PSEN1P49768 467 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 HDAC1Q13547 482 aaPredicted RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 HLFQ16534 295 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 BMP2KLQ5H9B9 411 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 USP48Q86UV5 1035 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 DZIP1LQ8IYY4 767 aaKnown RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 PIBF1Q8WXW3 757 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 GTF3C6Q969F1 213 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 GPHNQ9NQX3 736 aaPredicted RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 PTPRFP10586 1907 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 SMIM22K7EJ46 135 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 SOX1O00570 391 aaPredicted RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 SERPINB2P05120 415 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 WDR43Q15061 677 aaKnown RBP eCLIP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms