RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 MIGA1Q8NAN2 632 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 FHDC1Q9C0D6 1143 aaPredicted RBP8.65□□□□□ -1.02
SH3D19-203ENST00000409598 DHX36Q9H2U1 1008 aaKnown RBP8.65□□□□□ -1.02
SH3D19-203ENST00000409598 ODR4Q5SWX8 454 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 CCDC129Q6ZRS4 1044 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 CPXCR1Q8N123 301 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 RHPN1Q8TCX5 695 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 BICD1Q96G01 975 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 TLR3O15455 904 aaKnown RBP8.65□□□□□ -1.02
SH3D19-203ENST00000409598 SMC2O95347 1197 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 POTEAQ6S8J7 498 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 CHD1LQ86WJ1 897 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 CCDC17Q96LX7 622 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 CSRNP1Q96S65 589 aa8.65□□□□□ -1.02
SH3D19-203ENST00000409598 KCNA4P22459 653 aa8.65□□□□□ -1.03
SH3D19-203ENST00000409598 COPB2P35606 906 aa8.65□□□□□ -1.03
SH3D19-203ENST00000409598 GTF3C2Q8WUA4 911 aaPredicted RBP8.65□□□□□ -1.03
SH3D19-203ENST00000409598 CRAMP1Q96RY5 1269 aa8.65□□□□□ -1.03
SH3D19-203ENST00000409598 CARD14Q9BXL6 1004 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 BSDC1Q9NW68 430 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-203ENST00000409598 LMTK2Q8IWU2 1503 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 ECE2O60344 883 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 ZBTB33Q86T24 672 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 MCF2L2Q86YR7 1114 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 JAKMIP1Q96N16 626 aaKnown RBP8.64□□□□□ -1.03
SH3D19-203ENST00000409598 PDRG1Q9NUG6 133 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 ZC3H13Q5T200 1668 aaKnown RBP8.64□□□□□ -1.03
SH3D19-203ENST00000409598 NCAPD2Q15021 1401 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 RNF113AO15541 343 aaKnown RBP8.64□□□□□ -1.03
SH3D19-203ENST00000409598 CHRNA5P30532 468 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 CHRNDQ07001 517 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 NFIXQ14938 502 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 CERKLQ49MI3 558 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-203ENST00000409598 CALML4Q96GE6 196 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 PHACTR3Q96KR7 559 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 PARK7Q99497 189 aaKnown RBP8.64□□□□□ -1.03
SH3D19-203ENST00000409598 BACH2Q9BYV9 841 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 RRAGCQ9HB90 399 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 TCP11L1Q9NUJ3 509 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 MYO3AQ8NEV4 1616 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 NPC1L1Q9UHC9 1359 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-203ENST00000409598 TTLL7Q6ZT98 887 aa8.64□□□□□ -1.03
SH3D19-203ENST00000409598 TNPO2O14787 897 aaKnown RBP8.63□□□□□ -1.03
SH3D19-203ENST00000409598 FLOT1O75955 427 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 GNA11P29992 359 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 NAPAP54920 295 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 ATP8B2P98198 1209 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 PDE4DQ08499 809 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 CETN1Q12798 172 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 FOXD4L5Q5VV16 416 aaPredicted RBP8.63□□□□□ -1.03
SH3D19-203ENST00000409598 FOXD4L4Q8WXT5 416 aaPredicted RBP8.63□□□□□ -1.03
SH3D19-203ENST00000409598 SDF4Q9BRK5 362 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 BICC1Q9H694 974 aaKnown RBP8.63□□□□□ -1.03
SH3D19-203ENST00000409598 LRFN2Q9ULH4 789 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 MCM5P33992 734 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 EPHX2P34913 555 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 RARSP54136 660 aaKnown RBP8.63□□□□□ -1.03
SH3D19-203ENST00000409598 C8orf58Q8NAV2 365 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 FAM200AQ8TCP9 573 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 TCHPQ9BT92 498 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 FOXD4L1Q9NU39 408 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 HMG20BQ9P0W2 317 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 CNOT7Q9UIV1 285 aaKnown RBP8.63□□□□□ -1.03
SH3D19-203ENST00000409598 A0A1B0GUL7 405 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 SPATA5Q8NB90 893 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 CNTNAP4Q9C0A0 1308 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 SWAP70Q9UH65 585 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 ALKQ9UM73 1620 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 RRP9O43818 475 aaKnown RBP8.63□□□□□ -1.03
SH3D19-203ENST00000409598 TFCP2Q12800 502 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 AOC3Q16853 763 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 UPF1Q92900 1129 aaKnown RBP eCLIP8.63□□□□□ -1.03
SH3D19-203ENST00000409598 ADARB2Q9NS39 739 aaKnown RBP8.63□□□□□ -1.03
SH3D19-203ENST00000409598 DACH1Q9UI36 760 aa8.63□□□□□ -1.03
SH3D19-203ENST00000409598 CDK12Q9NYV4 1490 aaPredicted RBP8.62□□□□□ -1.03
SH3D19-203ENST00000409598 KIF28PB7ZC32 967 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 CHL1O00533 1208 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 TBCAO75347 108 aaKnown RBP8.62□□□□□ -1.03
SH3D19-203ENST00000409598 MAPKAPK5Q8IW41 473 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 FAM193BQ96PV7 902 aaPredicted RBP8.62□□□□□ -1.03
SH3D19-203ENST00000409598 MLXIPQ9HAP2 919 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 AATFQ9NY61 560 aaKnown RBP eCLIP8.62□□□□□ -1.03
SH3D19-203ENST00000409598 NEK4P51957 841 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 ABCB5Q2M3G0 1257 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 CFAP100Q494V2 611 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 MICALL2Q8IY33 904 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 CEP57L1Q8IYX8 460 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 CCDC155Q8N6L0 562 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 TGFBRAP1Q8WUH2 860 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 XAGE2Q96GT9 111 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 WDR70Q9NW82 654 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 KBTBD13C9JR72 458 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 TRMT1LQ7Z2T5 733 aaKnown RBP8.62□□□□□ -1.03
SH3D19-203ENST00000409598 ABI1Q8IZP0 508 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 TRIM6Q9C030 488 aaPredicted RBP8.62□□□□□ -1.03
SH3D19-203ENST00000409598 ARPP21Q9UBL0 812 aaPredicted RBP8.62□□□□□ -1.03
SH3D19-203ENST00000409598 PALM3A6NDB9 673 aaPredicted RBP8.62□□□□□ -1.03
SH3D19-203ENST00000409598 CYP27B1O15528 508 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 AMPD3Q01432 767 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms