RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 LEO1Q8WVC0 666 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 PPANQ9NQ55 473 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 FOXO3O43524 673 aa13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 DACT1Q9NYF0 836 aa13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 ADGRL1O94910 1474 aa13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 MAP7Q14244 749 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 NLRP3Q96P20 1036 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 GIPC1O14908 333 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 CCDC184Q52MB2 194 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 IQSEC3Q9UPP2 1182 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 DNMBPQ6XZF7 1577 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 CEBPAP49715 358 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 STX17P56962 302 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 NUF2Q9BZD4 464 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 SLC9C2Q5TAH2 1124 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 RSPH3Q86UC2 560 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 UTP11Q9Y3A2 253 aaKnown RBP13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 NSD2O96028 1365 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 LIN9Q5TKA1 542 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 ARID4AP29374 1257 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 LMOD1P29536 600 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 PAG1Q9NWQ8 432 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 CTNND2Q9UQB3 1225 aa13.81□□□□□ -0.2
CACNA1C-219ENST00000399649 TNFAIP3P21580 790 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 NUCB1Q02818 461 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 BIRC3Q13489 604 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 VWA3BQ502W6 1294 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 GBP6Q6ZN66 633 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 SV2BQ7L1I2 683 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 SPOPO43791 374 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 CALUO43852 315 aaPredicted RBP13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 LMNTD2Q8IXW0 634 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 LUC7L2Q9Y383 392 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 SP4Q02446 784 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 HAUS2Q9NVX0 235 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 SBNO2Q9Y2G9 1366 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 SRGAP1Q7Z6B7 1085 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 KMT5BQ4FZB7 885 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 RAB3IPQ96QF0 476 aaPredicted RBP13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
CACNA1C-219ENST00000399649 TUBBP07437 444 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 DNM1Q05193 864 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 TYRO3Q06418 890 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 CNGA4Q8IV77 575 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 TBC1D32Q96NH3 1257 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 ESYT1Q9BSJ8 1104 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 SDSP20132 328 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 SKAP1Q86WV1 359 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 MAGEB6Q8N7X4 407 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 UBAP1LF5GYI3 381 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 PARP1P09874 1014 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 IL15P40933 162 aaPredicted RBP13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 PPP1R2P41236 205 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 RBM26Q5T8P6 1007 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 PLIN2Q99541 437 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 CHPF2Q9P2E5 772 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 CDK13Q14004 1512 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 CNGA1P29973 690 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 SYT10Q6XYQ8 523 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 SDCCAG8Q86SQ7 713 aaPredicted RBP13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 MCM9Q9NXL9 1143 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 BIRC2Q13490 618 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 CCDC122Q5T0U0 273 aa13.79□□□□□ -0.2
CACNA1C-219ENST00000399649 SYNJ1O43426 1573 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 HARSP12081 509 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 SMTNP53814 917 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 NMIQ13287 307 aaPredicted RBP13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 ASIC2Q16515 512 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 B4GALNT4Q76KP1 1039 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 UBL4BQ8N7F7 174 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 VCXQ9H320 206 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 IFNKQ9P0W0 207 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 AKR1B15C9JRZ8 316 aaPredicted RBP13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 STRN3Q13033 797 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 TRPC3Q13507 836 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 GBP7Q8N8V2 638 aaPredicted RBP13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 MSH6P52701 1360 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 TOM1O60784 492 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 GIGYF1O75420 1035 aaPredicted RBP13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 BRAPQ7Z569 592 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 MRRFQ96E11 262 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 CPSF2Q9P2I0 782 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 PCK1P35558 622 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 NIP7Q9Y221 180 aaKnown RBP eCLIP13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 PARP3Q9Y6F1 533 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 ZNF131P52739 623 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 AFAP1L1Q8TED9 768 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 NOC4LQ9BVI4 516 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 AFG3L2Q9Y4W6 797 aa13.78□□□□□ -0.2
CACNA1C-219ENST00000399649 RNF113AO15541 343 aaKnown RBP13.77□□□□□ -0.2
CACNA1C-219ENST00000399649 ACTN4O43707 911 aaKnown RBP13.77□□□□□ -0.2
CACNA1C-219ENST00000399649 CCDC62Q6P9F0 684 aa13.77□□□□□ -0.2
CACNA1C-219ENST00000399649 NSMCE1Q8WV22 266 aa13.77□□□□□ -0.2
CACNA1C-219ENST00000399649 SH2D4AQ9H788 454 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms