RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 PFKFB1P16118 471 aa16.95■□□□□ 0.3
ITSN1-210ENST00000399353 RXRAP19793 462 aa16.95■□□□□ 0.3
ITSN1-210ENST00000399353 IGSF22Q8N9C0 903 aa16.95■□□□□ 0.3
ITSN1-210ENST00000399353 PLCD4Q9BRC7 762 aa16.95■□□□□ 0.3
ITSN1-210ENST00000399353 CDC23Q9UJX2 597 aa16.95■□□□□ 0.3
ITSN1-210ENST00000399353 CUTAO60888 179 aa16.95■□□□□ 0.3
ITSN1-210ENST00000399353 RPSAP08865 295 aaKnown RBP16.95■□□□□ 0.3
ITSN1-210ENST00000399353 E2F5Q15329 346 aa16.95■□□□□ 0.3
ITSN1-210ENST00000399353 PCMTD1Q96MG8 357 aaPredicted RBP16.95■□□□□ 0.3
ITSN1-210ENST00000399353 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 ADALQ6DHV7 355 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 KCNG4Q8TDN1 519 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 N4BP2L2Q92802 583 aaPredicted RBP16.94■□□□□ 0.3
ITSN1-210ENST00000399353 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 ATG3Q9NT62 314 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 LAMC1P11047 1609 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 MYO5CQ9NQX4 1742 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 PEX19P40855 299 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 MAP9Q49MG5 647 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 BEND6Q5SZJ8 279 aaPredicted RBP16.94■□□□□ 0.3
ITSN1-210ENST00000399353 GPIHBP1Q8IV16 184 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 CLIC6Q96NY7 704 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 CCDC85AQ96PX6 553 aaPredicted RBP16.94■□□□□ 0.3
ITSN1-210ENST00000399353 NUP88Q99567 741 aaPredicted RBP16.94■□□□□ 0.3
ITSN1-210ENST00000399353 MAP3K2Q9Y2U5 619 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 RALYLQ86SE5 291 aaKnown RBP16.94■□□□□ 0.3
ITSN1-210ENST00000399353 MRPL44Q9H9J2 332 aaKnown RBP16.94■□□□□ 0.3
ITSN1-210ENST00000399353 PSD3Q9NYI0 1048 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 ABCC1P33527 1531 aa16.94■□□□□ 0.3
ITSN1-210ENST00000399353 PSEN1P49768 467 aa16.93■□□□□ 0.3
ITSN1-210ENST00000399353 CCDC102BQ68D86 513 aa16.93■□□□□ 0.3
ITSN1-210ENST00000399353 KCTD16Q68DU8 428 aa16.93■□□□□ 0.3
ITSN1-210ENST00000399353 TRPM2O94759 1503 aa16.93■□□□□ 0.3
ITSN1-210ENST00000399353 FILIP1LQ4L180 1135 aa16.93■□□□□ 0.3
ITSN1-210ENST00000399353 EAF2Q96CJ1 260 aaPredicted RBP16.93■□□□□ 0.3
ITSN1-210ENST00000399353 A0A0U1RQJ8 604 aa16.93■□□□□ 0.3
ITSN1-210ENST00000399353 MYO1FO00160 1098 aa16.93■□□□□ 0.3
ITSN1-210ENST00000399353 GBP2P32456 591 aaPredicted RBP16.93■□□□□ 0.3
ITSN1-210ENST00000399353 SPECC1LQ69YQ0 1117 aa16.93■□□□□ 0.3
ITSN1-210ENST00000399353 FMR1NBQ8N0W7 255 aaPredicted RBP16.93■□□□□ 0.3
ITSN1-210ENST00000399353 SLF1Q9BQI6 1058 aa16.93■□□□□ 0.3
ITSN1-210ENST00000399353 KCNG1Q9UIX4 513 aa16.93■□□□□ 0.3
ITSN1-210ENST00000399353 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
ITSN1-210ENST00000399353 NPATQ14207 1427 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 TRIM29Q14134 588 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 ACRBPQ8NEB7 543 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 JADE2Q9NQC1 790 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 AOX1Q06278 1338 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 CLTCL1P53675 1640 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 GOLGA8BA8MQT2 603 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 AKR1B15C9JRZ8 316 aaPredicted RBP16.92■□□□□ 0.3
ITSN1-210ENST00000399353 FANCGO15287 622 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 IPO7O95373 1038 aaKnown RBP16.92■□□□□ 0.3
ITSN1-210ENST00000399353 CCT6AP40227 531 aaKnown RBP16.92■□□□□ 0.3
ITSN1-210ENST00000399353 CLNS1AP54105 237 aaKnown RBP16.92■□□□□ 0.3
ITSN1-210ENST00000399353 VSTM4Q8IW00 320 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 PSMB7Q99436 277 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 GPHNQ9NQX3 736 aaPredicted RBP16.92■□□□□ 0.3
ITSN1-210ENST00000399353 TRDNQ13061 729 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 EYA1Q99502 592 aa16.92■□□□□ 0.3
ITSN1-210ENST00000399353 PIP4K2AP48426 406 aaPredicted RBP16.91■□□□□ 0.3
ITSN1-210ENST00000399353 NOA1Q8NC60 698 aaKnown RBP16.91■□□□□ 0.3
ITSN1-210ENST00000399353 NSUN7Q8NE18 718 aaKnown RBP16.91■□□□□ 0.3
ITSN1-210ENST00000399353 CD248Q9HCU0 757 aa16.91■□□□□ 0.3
ITSN1-210ENST00000399353 HMG20BQ9P0W2 317 aa16.91■□□□□ 0.3
ITSN1-210ENST00000399353 LRRIQ3A6PVS8 624 aaPredicted RBP16.91■□□□□ 0.3
ITSN1-210ENST00000399353 EXOC5O00471 708 aa16.91■□□□□ 0.3
ITSN1-210ENST00000399353 AFMP43652 599 aa16.91■□□□□ 0.3
ITSN1-210ENST00000399353 NAP1L1P55209 391 aaKnown RBP16.91■□□□□ 0.3
ITSN1-210ENST00000399353 PIP4K2BP78356 416 aa16.91■□□□□ 0.3
ITSN1-210ENST00000399353 FKBP4Q02790 459 aaKnown RBP eCLIP16.91■□□□□ 0.3
ITSN1-210ENST00000399353 BIRC2Q13490 618 aa16.91■□□□□ 0.3
ITSN1-210ENST00000399353 TTC5Q8N0Z6 440 aa16.91■□□□□ 0.3
ITSN1-210ENST00000399353 NAPGQ99747 312 aaPredicted RBP16.91■□□□□ 0.3
ITSN1-210ENST00000399353 JMYQ8N9B5 988 aa16.91■□□□□ 0.3
ITSN1-210ENST00000399353 SHPRHQ149N8 1683 aa16.91■□□□□ 0.3
ITSN1-210ENST00000399353 SND1Q7KZF4 910 aaKnown RBP eCLIP16.9■□□□□ 0.3
ITSN1-210ENST00000399353 PCDHA5Q9Y5H7 936 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 ZFYVE9O95405 1425 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 GOLGA6BA6NDN3 693 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 CALRP27797 417 aaKnown RBP16.9■□□□□ 0.3
ITSN1-210ENST00000399353 KIAA1328Q86T90 577 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 ATP7AQ04656 1500 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 LRRC7Q96NW7 1537 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 CEP152O94986 1710 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 CHRM1P11229 460 aaPredicted RBP16.9■□□□□ 0.3
ITSN1-210ENST00000399353 GGCXP38435 758 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 CCDC114Q96M63 670 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 CAPS2Q9BXY5 557 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 L1RE1Q9UN81 338 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 MAP3K19Q56UN5 1328 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 STX10O60499 249 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 ODF2LQ9ULJ1 636 aa16.9■□□□□ 0.3
ITSN1-210ENST00000399353 MYOM1P52179 1685 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 IQGAP3Q86VI3 1631 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 KIAA0232Q92628 1395 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 KLF18A0A0U1RQI7 1052 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 SRGAP2O75044 1071 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 CYP21A2P08686 494 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms