RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 ZNF697Q5TEC3 545 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 PPP4R4Q6NUP7 873 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 BPHLQ86WA6 291 aaPredicted RBP7.11□□□□□ -1.27
ERCC4-202ENST00000389138 ATL2Q8NHH9 583 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 GAS2L2Q8NHY3 880 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 SIN3AQ96ST3 1273 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.11□□□□□ -1.27
ERCC4-202ENST00000389138 GOLGA6AQ9NYA3 693 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 ANAPC4Q9UJX5 808 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 ATP8A1Q9Y2Q0 1164 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 DYTNA2CJ06 578 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 CCDC85CA6NKD9 419 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 ZRANB2O95218 330 aaKnown RBP eCLIP7.1□□□□□ -1.27
ERCC4-202ENST00000389138 MZF1P28698 734 aaPredicted RBP7.1□□□□□ -1.27
ERCC4-202ENST00000389138 SH3BP2P78314 561 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 CCDC174Q6PII3 467 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 PAF1Q8N7H5 531 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.1□□□□□ -1.27
ERCC4-202ENST00000389138 DEPDC7Q96QD5 511 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 CDC5LQ99459 802 aaKnown RBP7.1□□□□□ -1.27
ERCC4-202ENST00000389138 ADGRB3O60242 1522 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 GPR182O15218 404 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 MYL1P05976 194 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 SRGNP10124 158 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 TERF1P54274 439 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 LINC01559Q495D7 138 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 ARSHQ5FYA8 562 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 SH3BP5LQ7L8J4 393 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 APPBP2Q92624 585 aa7.1□□□□□ -1.27
ERCC4-202ENST00000389138 ASXL1Q8IXJ9 1541 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 EHBP1L1Q8N3D4 1523 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 SHTN1A0MZ66 631 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 WNT7AO00755 349 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 ZBTB7BO15156 539 aaPredicted RBP7.09□□□□□ -1.27
ERCC4-202ENST00000389138 NPHP1O15259 732 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 SCGB1D2O95969 90 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 VARSP26640 1264 aaKnown RBP7.09□□□□□ -1.27
ERCC4-202ENST00000389138 ETFBP38117 255 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 NAA30Q147X3 362 aaPredicted RBP7.09□□□□□ -1.27
ERCC4-202ENST00000389138 DRC7Q8IY82 874 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 CHPFQ8IZ52 775 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 TSPAN18Q96SJ8 248 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 LRRC27Q9C0I9 530 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 CHIC2Q9UKJ5 165 aa7.09□□□□□ -1.27
ERCC4-202ENST00000389138 MRPS23Q9Y3D9 190 aaKnown RBP7.09□□□□□ -1.27
ERCC4-202ENST00000389138 MARF1Q9Y4F3 1742 aaKnown RBP7.09□□□□□ -1.27
ERCC4-202ENST00000389138 ARHGAP31Q2M1Z3 1444 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 NCOA3Q9Y6Q9 1424 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 A6NJY4 79 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 KLF4O43474 513 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 VDRP11473 427 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 SKOR1P84550 965 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 PLCB3Q01970 1234 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 FKBP5Q13451 457 aaPredicted RBP7.09□□□□□ -1.28
ERCC4-202ENST00000389138 PPP2R5AQ15172 486 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 TSGA10IPQ3SY00 556 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 SLC26A8Q96RN1 970 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 ARHGAP9Q9BRR9 750 aa7.09□□□□□ -1.28
ERCC4-202ENST00000389138 PUF60Q9UHX1 559 aaKnown RBP7.09□□□□□ -1.28
ERCC4-202ENST00000389138 NPR3P17342 541 aa7.08□□□□□ -1.28
ERCC4-202ENST00000389138 AGERQ15109 404 aa7.08□□□□□ -1.28
ERCC4-202ENST00000389138 C1QTNF12Q5T7M4 302 aa7.08□□□□□ -1.28
ERCC4-202ENST00000389138 RC3H1Q5TC82 1133 aaKnown RBP7.08□□□□□ -1.28
ERCC4-202ENST00000389138 CRELD1Q96HD1 420 aa7.08□□□□□ -1.28
ERCC4-202ENST00000389138 TAGLN3Q9UI15 199 aa7.08□□□□□ -1.28
ERCC4-202ENST00000389138 MRVI1Q9Y6F6 885 aa7.08□□□□□ -1.28
ERCC4-202ENST00000389138 BRWD3Q6RI45 1802 aa7.08□□□□□ -1.28
ERCC4-202ENST00000389138 ZBBXA8MT70 800 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 ERAP2Q6P179 960 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 SH3RF1Q7Z6J0 888 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 PHTF2Q8N3S3 785 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 PLPP7Q8NBV4 271 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 MYRIPQ8NFW9 859 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 CCDC87Q9NVE4 849 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 DNAAF2Q9NVR5 837 aaKnown RBP7.07□□□□□ -1.28
ERCC4-202ENST00000389138 SIRPGQ9P1W8 387 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 SPHKAPQ2M3C7 1700 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 MYOM3Q5VTT5 1437 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 GCC2Q8IWJ2 1684 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 RRM1P23921 792 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 PRR20EP86478 221 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 PRR20CP86479 221 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 PRR20DP86480 221 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 PRR20BP86481 221 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 PRR20AP86496 221 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 PTPN12Q05209 780 aaKnown RBP7.07□□□□□ -1.28
ERCC4-202ENST00000389138 MCL1Q07820 350 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 SQSTM1Q13501 440 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 RAB33AQ14088 237 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 CCDC93Q567U6 631 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.07□□□□□ -1.28
ERCC4-202ENST00000389138 ANKS3Q6ZW76 656 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 MPNDQ8N594 471 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 EHBP1Q8NDI1 1231 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 TMC1Q8TDI8 760 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 FOXJ1Q92949 421 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 NGLY1Q96IV0 654 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 DNAJC7Q99615 494 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 CFHR5Q9BXR6 569 aa7.07□□□□□ -1.28
ERCC4-202ENST00000389138 NOD1Q9Y239 953 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms