RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 FGFR2P21802 821 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 GPTP24298 496 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 ALX1Q15699 326 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 GLIPR1L2Q4G1C9 344 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 MYSM1Q5VVJ2 828 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 AK7Q96M32 723 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 PIH1D3Q9NQM4 214 aaKnown RBP13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 CNNM1Q9NRU3 951 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 ANGEL1Q9UNK9 670 aaKnown RBP13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 GOLGA6L19H0YKK7 550 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 UQCRFS1P1P0C7P4 283 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 CCDC102BQ68D86 513 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 OTUD7BQ6GQQ9 843 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 ZNF34Q8IZ26 560 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 CLIP2Q9UDT6 1046 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 CLIC4Q9Y696 253 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 ZMYM6O95789 1325 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 NEDD4P46934 1319 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 C4AP0C0L4 1744 aa13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 C4BP0C0L5 1744 aa13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 MYH3P11055 1940 aa13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 CPLX1O14810 134 aa13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 KIF23Q02241 960 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 TBC1D10CQ8IV04 446 aa13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 DRC7Q8IY82 874 aa13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 BTG4Q9NY30 223 aa13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 TRMT112Q9UI30 125 aaKnown RBP13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 ZBTB1Q9Y2K1 713 aa13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 ZNF335Q9H4Z2 1342 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF9-201ENST00000377507 SH2B2O14492 632 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 SPTLC2O15270 562 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 PDE6AP16499 860 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 NDUFA8P51970 172 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 LRMPQ12912 555 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 TRDNQ13061 729 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 CCDC144BQ3MJ40 725 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 AXDND1Q5T1B0 1012 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 CCDC144CPQ8IYA2 1237 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 CACTINQ8WUQ7 758 aaKnown RBP13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 LPIN2Q92539 896 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 TMEM87BQ96K49 555 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 STRBPQ96SI9 672 aaKnown RBP13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 BPIFA3Q9BQP9 254 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 MROH5Q6ZUA9 1318 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 UBN2Q6ZU65 1347 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 ZNF532Q9HCE3 1301 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 KIF28PB7ZC32 967 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 NEMFO60524 1076 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 POLR3DP05423 398 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 PHKA1P46020 1223 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 STK38Q15208 465 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 PUM3Q15397 648 aaKnown RBP13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 ANO1Q5XXA6 986 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 CYB5R4Q7L1T6 521 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 CEP57L1Q8IYX8 460 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 NKX2-3Q8TAU0 364 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 NAT10Q9H0A0 1025 aaKnown RBP13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 KIAA1468Q9P260 1216 aa13.68□□□□□ -0.22
TNFRSF9-201ENST00000377507 A0A1B0GVL5 298 aa13.67□□□□□ -0.22
TNFRSF9-201ENST00000377507 CMA1P23946 247 aa13.67□□□□□ -0.22
TNFRSF9-201ENST00000377507 RBM6P78332 1123 aaKnown RBP13.67□□□□□ -0.22
TNFRSF9-201ENST00000377507 SGMS1Q86VZ5 419 aa13.67□□□□□ -0.22
TNFRSF9-201ENST00000377507 LRRC8AQ8IWT6 810 aa13.67□□□□□ -0.22
TNFRSF9-201ENST00000377507 IGDCC4Q8TDY8 1250 aa13.67□□□□□ -0.22
TNFRSF9-201ENST00000377507 DENND2AQ9ULE3 1009 aa13.67□□□□□ -0.22
TNFRSF9-201ENST00000377507 TBC1D2BQ9UPU7 963 aa13.67□□□□□ -0.22
TNFRSF9-201ENST00000377507 NUP98P52948 1817 aa13.67□□□□□ -0.22
TNFRSF9-201ENST00000377507 ARAP2Q8WZ64 1704 aa13.67□□□□□ -0.22
TNFRSF9-201ENST00000377507 BECN2A8MW95 431 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 IDH1O75874 414 aaKnown RBP13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 CDKL5O76039 1030 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 PRKCSHP14314 528 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 SLC39A14Q15043 492 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 APOA5Q6Q788 366 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 SYNE3Q6ZMZ3 975 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 SDF4Q9BRK5 362 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 GJB4Q9NTQ9 266 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 WWC3Q9ULE0 1092 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 CTIFO43310 598 aaKnown RBP13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 METAP2P50579 478 aaKnown RBP eCLIP13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 CHAF1AQ13111 956 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 NTRK3Q16288 839 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 TIGD1Q96MW7 591 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 SLIT2O94813 1529 aa13.66□□□□□ -0.22
TNFRSF9-201ENST00000377507 PLCH1Q4KWH8 1693 aa13.65□□□□□ -0.22
TNFRSF9-201ENST00000377507 FAM237AA0A1B0GTK4 181 aa13.65□□□□□ -0.22
TNFRSF9-201ENST00000377507 PPP6R2O75170 966 aa13.65□□□□□ -0.22
TNFRSF9-201ENST00000377507 ZNF202O95125 648 aa13.65□□□□□ -0.22
TNFRSF9-201ENST00000377507 LIFRP42702 1097 aa13.65□□□□□ -0.22
TNFRSF9-201ENST00000377507 EIF5P55010 431 aaKnown RBP13.65□□□□□ -0.22
TNFRSF9-201ENST00000377507 SPATA5Q8NB90 893 aa13.65□□□□□ -0.22
TNFRSF9-201ENST00000377507 FAM217BQ9NTX9 383 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF9-201ENST00000377507 COL14A1Q05707 1796 aaKnown RBP13.65□□□□□ -0.22
TNFRSF9-201ENST00000377507 RIOK3O14730 519 aaKnown RBP13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 U2AF2P26368 475 aaKnown RBP eCLIP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms