RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 BTDP43251 543 aa9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 MKRN3Q13064 507 aaKnown RBP9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 PTF1AQ7RTS3 328 aa9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 ANTXR1Q9H6X2 564 aa9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 BMP2KQ9NSY1 1161 aaPredicted RBP9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 NRXN1Q9ULB1 1477 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 H7C1W4 665 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 CACNB3P54284 484 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 AOC3Q16853 763 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 WWC2Q6AWC2 1192 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 CIAPIN1Q6FI81 312 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 TMTC2Q8N394 836 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 CSADQ9Y600 493 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 NCOA3Q9Y6Q9 1424 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 ATP5JP18859 108 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 TNFAIP1Q13829 316 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 SMCR8Q8TEV9 937 aaPredicted RBP9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 ZNF521Q96K83 1311 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 PPP1R12BO60237 982 aaPredicted RBP9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 MATR3P43243 847 aaKnown RBP eCLIP9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 NAPAP54920 295 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 TBC1D10BQ4KMP7 808 aaPredicted RBP9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 OLFM4Q6UX06 510 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 RTKN2Q8IZC4 609 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 PDILTQ8N807 584 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 HOMER2Q9NSB8 354 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 FAM13BQ9NYF5 915 aa9.82□□□□□ -0.84
CRNKL1-202ENST00000377340 DCCP43146 1447 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 HMGN5P82970 282 aaKnown RBP9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 FCHSD1Q86WN1 690 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 MYL10Q9BUA6 226 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 TMOD4Q9NZQ9 345 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 CFAP45Q9UL16 551 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 GJB2P29033 226 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 TFAP4Q01664 338 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 PRR5LQ6MZQ0 368 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 USP48Q86UV5 1035 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 BRIP1Q9BX63 1249 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 TPM1P09493 284 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 COL23A1Q86Y22 540 aaPredicted RBP9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 TRMT2AQ8IZ69 625 aaKnown RBP9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 SMARCC2Q8TAQ2 1214 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 HELLSQ9NRZ9 838 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 MINPP1Q9UNW1 487 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 LRRC7Q96NW7 1537 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 CARMIL3Q8ND23 1372 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 SLC1A4P43007 532 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 MIGA2Q7L4E1 593 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 CKAP2LQ8IYA6 745 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 CCDC12Q8WUD4 166 aaPredicted RBP9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 ALG1Q9BT22 464 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 CLIP2Q9UDT6 1046 aa9.81□□□□□ -0.84
CRNKL1-202ENST00000377340 MYO3AQ8NEV4 1616 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 hCG_1642624A0A1W2PR95 340 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 NFKBIBQ15653 356 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 POTEAQ6S8J7 498 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 ILDR1Q86SU0 546 aaPredicted RBP9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 UBA5Q9GZZ9 404 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 BSDC1Q9NW68 430 aaPredicted RBP9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 ARHGAP23Q9P227 1491 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 OFD1O75665 1012 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 SEC24BO95487 1268 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 DHX32Q7L7V1 743 aaKnown RBP9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 PKD2L1Q9P0L9 805 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 ADGRB1O14514 1584 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 CC2D2BQ6DHV5 1058 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 UIMC1Q96RL1 719 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 PAGR1Q9BTK6 254 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 TBC1D2Q9BYX2 928 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 ARHGEF10LQ9HCE6 1279 aa9.8□□□□□ -0.84
CRNKL1-202ENST00000377340 CPDO75976 1380 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 GNAQP50148 359 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 DYNLL1P63167 89 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 NSMFQ6X4W1 530 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 TMC4Q7Z404 712 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 CSRNP1Q96S65 589 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 TMX3Q96JJ7 454 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 ABT1Q9ULW3 272 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 SLIT1O75093 1534 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 LAMC1P11047 1609 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 NCAPD2Q15021 1401 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 A0A0D9SFI3 127 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 USP17L3A6NCW0 530 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 USP17L4A6NCW7 530 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 TPM3P06753 285 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 IDEP14735 1019 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 IRX3P78415 501 aaPredicted RBP9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 CCDC178Q5BJE1 867 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 USP17L1Q7RTZ2 530 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 PALD1Q9ULE6 856 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 IVNS1ABPQ9Y6Y0 642 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 SASH1O94885 1247 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 CAMTA2O94983 1202 aa9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 RC3H1Q5TC82 1133 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-202ENST00000377340 PARP1P09874 1014 aaKnown RBP9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 DPEP1P16444 411 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 DEKP35659 375 aaKnown RBP9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 CAMK4Q16566 473 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms