RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 RPL13P26373 211 aaKnown RBP13.99□□□□□ -0.17
VPS13A-204ENST00000376634 Q6ZUG5 572 aa13.99□□□□□ -0.17
VPS13A-204ENST00000376634 RILPL1Q5EBL4 403 aa13.99□□□□□ -0.17
VPS13A-204ENST00000376634 I3L4J1 428 aa13.99□□□□□ -0.17
VPS13A-204ENST00000376634 CETN3O15182 167 aa13.99□□□□□ -0.17
VPS13A-204ENST00000376634 TUBBP07437 444 aa13.99□□□□□ -0.17
VPS13A-204ENST00000376634 MCMDC2Q4G0Z9 681 aa13.99□□□□□ -0.17
VPS13A-204ENST00000376634 GSDMBQ8TAX9 411 aa13.99□□□□□ -0.17
VPS13A-204ENST00000376634 F8W031 263 aaPredicted RBP13.99□□□□□ -0.17
VPS13A-204ENST00000376634 SNRPA1P09661 255 aaKnown RBP13.99□□□□□ -0.17
VPS13A-204ENST00000376634 PCK1P35558 622 aa13.99□□□□□ -0.17
VPS13A-204ENST00000376634 TSNAXIP1Q2TAA8 658 aa13.99□□□□□ -0.17
VPS13A-204ENST00000376634 LMNTD2Q8IXW0 634 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 MAGEB6P1A0A0J9YX57 407 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 FAM114A2Q9NRY5 505 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 BAZ2BQ9UIF8 2168 aaKnown RBP13.98□□□□□ -0.17
VPS13A-204ENST00000376634 RABGAP1Q9Y3P9 1069 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 KRT79Q5XKE5 535 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 MAP7Q14244 749 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 GKAP1Q5VSY0 366 aaPredicted RBP13.98□□□□□ -0.17
VPS13A-204ENST00000376634 ARFGAP2Q8N6H7 521 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 ANKRD24Q8TF21 1146 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 DHX58Q96C10 678 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 LZTFL1Q9NQ48 299 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 SCAF11Q99590 1463 aaKnown RBP13.98□□□□□ -0.17
VPS13A-204ENST00000376634 BACH1O14867 736 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 LMOD1P29536 600 aaPredicted RBP13.98□□□□□ -0.17
VPS13A-204ENST00000376634 STMN1P16949 149 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 HPDP32754 393 aaPredicted RBP13.98□□□□□ -0.17
VPS13A-204ENST00000376634 TNNI2P48788 182 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 VEZTQ9HBM0 779 aa13.98□□□□□ -0.17
VPS13A-204ENST00000376634 RHOXF2BP0C7M4 288 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 TYRO3Q06418 890 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 RSPH3Q86UC2 560 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 RHOXF2Q9BQY4 288 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 CCDC94Q9BW85 323 aaPredicted RBP13.97□□□□□ -0.17
VPS13A-204ENST00000376634 LRRC2Q9BYS8 371 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 NYXQ9GZU5 481 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 NCOA1Q15788 1441 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 SPTLC2O15270 562 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 ZBTB21Q9ULJ3 1066 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 RFC1P35251 1148 aaPredicted RBP13.97□□□□□ -0.17
VPS13A-204ENST00000376634 NEDD9Q14511 834 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 ERCC5P28715 1186 aaPredicted RBP13.97□□□□□ -0.17
VPS13A-204ENST00000376634 TAOK1Q7L7X3 1001 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 USP48Q86UV5 1035 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 RAPGEF3O95398 923 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 ERCC3P19447 782 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 PAG1Q9NWQ8 432 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 VIMP08670 466 aaKnown RBP13.97□□□□□ -0.17
VPS13A-204ENST00000376634 NOLC1Q14978 699 aaKnown RBP eCLIP13.97□□□□□ -0.17
VPS13A-204ENST00000376634 WAPLQ7Z5K2 1190 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 ACTN4O43707 911 aaKnown RBP13.97□□□□□ -0.17
VPS13A-204ENST00000376634 DTHD1Q6ZMT9 781 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 FAM204AQ9H8W3 233 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 RAPGEF6Q8TEU7 1601 aa13.97□□□□□ -0.17
VPS13A-204ENST00000376634 PI4KAP2A4QPH2 592 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 SDCCAG8Q86SQ7 713 aaPredicted RBP13.96□□□□□ -0.17
VPS13A-204ENST00000376634 PI4KAP1Q8N8J0 262 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 RNF34Q969K3 372 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 RAPGEF1Q13905 1077 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 SPOPO43791 374 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 NUCB1Q02818 461 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 CCDC125Q86Z20 511 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 MCUR1Q96AQ8 359 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 BRAPQ7Z569 592 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 LIN9Q5TKA1 542 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 CTNND2Q9UQB3 1225 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 BIRC3Q13489 604 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 NME9Q86XW9 330 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 TBC1D32Q96NH3 1257 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 RASSF4Q9H2L5 321 aa13.96□□□□□ -0.17
VPS13A-204ENST00000376634 RBM28Q9NW13 759 aaKnown RBP13.96□□□□□ -0.17
VPS13A-204ENST00000376634 USH1CQ9Y6N9 552 aa13.96□□□□□ -0.18
VPS13A-204ENST00000376634 SH2D4BQ5SQS7 431 aa13.96□□□□□ -0.18
VPS13A-204ENST00000376634 C20orf194Q5TEA3 1177 aa13.96□□□□□ -0.18
VPS13A-204ENST00000376634 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.18
VPS13A-204ENST00000376634 UBE2Q2Q8WVN8 375 aa13.96□□□□□ -0.18
VPS13A-204ENST00000376634 ZNF830Q96NB3 372 aaPredicted RBP13.96□□□□□ -0.18
VPS13A-204ENST00000376634 ZNF569Q5MCW4 686 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 CDAN1Q8IWY9 1227 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 BRF1Q92994 677 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 NOC2LQ9Y3T9 749 aaKnown RBP13.95□□□□□ -0.18
VPS13A-204ENST00000376634 VWA3BQ502W6 1294 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 IFNL2Q8IZJ0 200 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 NECAB1Q8N987 351 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 MYH9P35579 1960 aaKnown RBP13.95□□□□□ -0.18
VPS13A-204ENST00000376634 ATP6V1AP38606 617 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 DAPK3O43293 454 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 CHPF2Q9P2E5 772 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 CFAP43Q8NDM7 1665 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 PDE1CQ14123 709 aaPredicted RBP13.95□□□□□ -0.18
VPS13A-204ENST00000376634 CCDC122Q5T0U0 273 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 LEO1Q8WVC0 666 aaPredicted RBP13.95□□□□□ -0.18
VPS13A-204ENST00000376634 NACA2Q9H009 215 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 A0A1B0GUL7 405 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 PPP1R21Q6ZMI0 780 aa13.95□□□□□ -0.18
VPS13A-204ENST00000376634 PHLDB2Q86SQ0 1253 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms