RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CBX1P83916 185 aa16.91■□□□□ 0.3
MSH5-201ENST00000375703 ANO1Q5XXA6 986 aa16.91■□□□□ 0.3
MSH5-201ENST00000375703 SYNE4Q8N205 404 aa16.91■□□□□ 0.3
MSH5-201ENST00000375703 ABCC12Q96J65 1359 aa16.91■□□□□ 0.3
MSH5-201ENST00000375703 WDR19Q8NEZ3 1342 aa16.91■□□□□ 0.3
MSH5-201ENST00000375703 UBR2Q8IWV8 1755 aa16.91■□□□□ 0.3
MSH5-201ENST00000375703 KIF28PB7ZC32 967 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 SLC3A2P08195 630 aaKnown RBP16.9■□□□□ 0.3
MSH5-201ENST00000375703 MCAMP43121 646 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 DPCR1Q3MIW9 517 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
MSH5-201ENST00000375703 USP27XA6NNY8 438 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 KIF23Q02241 960 aaPredicted RBP16.9■□□□□ 0.3
MSH5-201ENST00000375703 SYCP1Q15431 976 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 PTPN14Q15678 1187 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 SLC9C2Q5TAH2 1124 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 DNAJC10Q8IXB1 793 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 STRN4Q9NRL3 753 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 TNS2Q63HR2 1409 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 APPP05067 770 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 EVA1CP58658 441 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 CCZ1BP86790 482 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 CCZ1P86791 482 aaPredicted RBP16.9■□□□□ 0.3
MSH5-201ENST00000375703 NCBP1Q09161 790 aaKnown RBP16.9■□□□□ 0.3
MSH5-201ENST00000375703 BRINP3Q76B58 766 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 BPIFA3Q9BQP9 254 aa16.9■□□□□ 0.3
MSH5-201ENST00000375703 ITGA6P23229 1130 aa16.89■□□□□ 0.29
MSH5-201ENST00000375703 CMA1P23946 247 aa16.89■□□□□ 0.29
MSH5-201ENST00000375703 ADD2P35612 726 aa16.89■□□□□ 0.29
MSH5-201ENST00000375703 GSDMDP57764 484 aa16.89■□□□□ 0.29
MSH5-201ENST00000375703 CNNM1Q9NRU3 951 aa16.89■□□□□ 0.29
MSH5-201ENST00000375703 NWD2Q9ULI1 1742 aa16.89■□□□□ 0.29
MSH5-201ENST00000375703 BIN1O00499 593 aa16.89■□□□□ 0.29
MSH5-201ENST00000375703 AXDND1Q5T1B0 1012 aaPredicted RBP16.89■□□□□ 0.29
MSH5-201ENST00000375703 TTLL11Q8NHH1 800 aa16.89■□□□□ 0.29
MSH5-201ENST00000375703 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.29
MSH5-201ENST00000375703 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
MSH5-201ENST00000375703 ANGEL1Q9UNK9 670 aaKnown RBP16.89■□□□□ 0.29
MSH5-201ENST00000375703 STARD3NLO95772 234 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 GPTP24298 496 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 NLRP12P59046 1061 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 TTF1Q15361 905 aaPredicted RBP16.88■□□□□ 0.29
MSH5-201ENST00000375703 GIGYF2Q6Y7W6 1299 aaKnown RBP16.88■□□□□ 0.29
MSH5-201ENST00000375703 NBPF11Q86T75 865 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 GREM2Q9H772 168 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 IMPACTQ9P2X3 320 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 DENND2AQ9ULE3 1009 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
MSH5-201ENST00000375703 SLC39A14Q15043 492 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 ALG1Q9BT22 464 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 NBPF3Q9H094 633 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 PRDM10Q9NQV6 1147 aa16.88■□□□□ 0.29
MSH5-201ENST00000375703 COL5A2P05997 1499 aaPredicted RBP16.87■□□□□ 0.29
MSH5-201ENST00000375703 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 IDH1O75874 414 aaKnown RBP16.87■□□□□ 0.29
MSH5-201ENST00000375703 PFKFB1P16118 471 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 MARCKSP29966 332 aaPredicted RBP16.87■□□□□ 0.29
MSH5-201ENST00000375703 TPM4P67936 248 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 HLFQ16534 295 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 NYAP1Q6ZVC0 841 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 CYB5R4Q7L1T6 521 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
MSH5-201ENST00000375703 ZMYM6O95789 1325 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 NEDD4P46934 1319 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 MAP3K15Q6ZN16 1313 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 WDHD1O75717 1129 aaPredicted RBP16.87■□□□□ 0.29
MSH5-201ENST00000375703 SMC2O95347 1197 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 RGS22Q8NE09 1264 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 AIFM3Q96NN9 605 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 XPO4Q9C0E2 1151 aaKnown RBP16.87■□□□□ 0.29
MSH5-201ENST00000375703 IFNKQ9P0W0 207 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
MSH5-201ENST00000375703 SPDYE4A6NLX3 237 aa16.86■□□□□ 0.29
MSH5-201ENST00000375703 CDKL5O76039 1030 aa16.86■□□□□ 0.29
MSH5-201ENST00000375703 U2AF2P26368 475 aaKnown RBP eCLIP16.86■□□□□ 0.298e-8■■■■□ 26.3
MSH5-201ENST00000375703 NLRP10Q86W26 655 aa16.86■□□□□ 0.29
MSH5-201ENST00000375703 TBC1D10CQ8IV04 446 aa16.86■□□□□ 0.29
MSH5-201ENST00000375703 CCAR2Q8N163 923 aaKnown RBP16.86■□□□□ 0.29
MSH5-201ENST00000375703 ZNF512BQ96KM6 892 aaPredicted RBP16.86■□□□□ 0.29
MSH5-201ENST00000375703 CDHR2Q9BYE9 1310 aa16.86■□□□□ 0.29
MSH5-201ENST00000375703 RXRAP19793 462 aa16.86■□□□□ 0.29
MSH5-201ENST00000375703 GNL2Q13823 731 aaKnown RBP16.86■□□□□ 0.29
MSH5-201ENST00000375703 UBE3CQ15386 1083 aa16.86■□□□□ 0.29
MSH5-201ENST00000375703 CPLX2Q6PUV4 134 aaKnown RBP16.86■□□□□ 0.29
MSH5-201ENST00000375703 PIGBQ92521 554 aa16.86■□□□□ 0.29
MSH5-201ENST00000375703 PIH1D3Q9NQM4 214 aaKnown RBP16.86■□□□□ 0.29
MSH5-201ENST00000375703 STRCP1A6NGW2 1772 aa16.85■□□□□ 0.29
MSH5-201ENST00000375703 SH2B2O14492 632 aaPredicted RBP16.85■□□□□ 0.29
MSH5-201ENST00000375703 NAA30Q147X3 362 aaPredicted RBP16.85■□□□□ 0.29
MSH5-201ENST00000375703 KRT40Q6A162 431 aa16.85■□□□□ 0.29
MSH5-201ENST00000375703 NKX2-3Q8TAU0 364 aa16.85■□□□□ 0.29
MSH5-201ENST00000375703 B4E1Z4 1266 aa16.85■□□□□ 0.29
MSH5-201ENST00000375703 CTSWP56202 376 aa16.85■□□□□ 0.29
MSH5-201ENST00000375703 ISM2Q6H9L7 571 aa16.85■□□□□ 0.29
MSH5-201ENST00000375703 VPS37DQ86XT2 251 aa16.85■□□□□ 0.29
MSH5-201ENST00000375703 ZNF532Q9HCE3 1301 aa16.85■□□□□ 0.29
MSH5-201ENST00000375703 PAPPAQ13219 1627 aa16.85■□□□□ 0.29
MSH5-201ENST00000375703 RIC1Q4ADV7 1423 aa16.85■□□□□ 0.29
MSH5-201ENST00000375703 SYKP43405 635 aa16.84■□□□□ 0.29
MSH5-201ENST00000375703 TMC6Q7Z403 805 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms