RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NLRP7Q8WX94 980 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 SH3KBP1Q96B97 665 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 PAWRQ96IZ0 340 aaKnown RBP10.54□□□□□ -0.72
UBR4-201ENST00000375218 DNAI2Q9GZS0 605 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 DIAPH3Q9NSV4 1193 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 ANKRD45Q5TZF3 282 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 ANKRD42Q8N9B4 389 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 NOL10Q9BSC4 688 aaKnown RBP10.54□□□□□ -0.72
UBR4-201ENST00000375218 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 HCLS1P14317 486 aaPredicted RBP10.54□□□□□ -0.72
UBR4-201ENST00000375218 CA8P35219 290 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 JAMLQ86YT9 394 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 KLHL23Q8NBE8 558 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 NEK9Q8TD19 979 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 SLC39A13Q96H72 371 aa10.54□□□□□ -0.72
UBR4-201ENST00000375218 GOLGA6L3A6NEY3 463 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 VAMP1P23763 118 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 FKBP15Q5T1M5 1219 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 KIF2CQ99661 725 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 N6AMT1Q9Y5N5 214 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 ADAMTS7Q9UKP4 1686 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 DIAPH1O60610 1272 aaKnown RBP10.53□□□□□ -0.72
UBR4-201ENST00000375218 NBNO60934 754 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 RFC5P40937 340 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 AGR2O95994 175 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 HSP90AB1P08238 724 aaKnown RBP10.53□□□□□ -0.72
UBR4-201ENST00000375218 JPH3Q8WXH2 748 aaPredicted RBP10.53□□□□□ -0.72
UBR4-201ENST00000375218 NELL2Q99435 816 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 NCAPGQ9BPX3 1015 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 ABCG4Q9H172 646 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 ZBED9Q6R2W3 1325 aa10.53□□□□□ -0.72
UBR4-201ENST00000375218 MINK1Q8N4C8 1332 aaPredicted RBP10.53□□□□□ -0.72
UBR4-201ENST00000375218 PTK7Q13308 1070 aa10.52□□□□□ -0.72
UBR4-201ENST00000375218 K7ELQ4 463 aaPredicted RBP10.52□□□□□ -0.73
UBR4-201ENST00000375218 MYCLP1P12525 358 aaPredicted RBP10.52□□□□□ -0.73
UBR4-201ENST00000375218 KCNJ4P48050 445 aa10.52□□□□□ -0.73
UBR4-201ENST00000375218 SLC7A5Q01650 507 aa10.52□□□□□ -0.73
UBR4-201ENST00000375218 ZNF211Q13398 564 aaPredicted RBP10.52□□□□□ -0.73
UBR4-201ENST00000375218 BIRC3Q13489 604 aa10.52□□□□□ -0.73
UBR4-201ENST00000375218 COBLL1Q53SF7 1204 aa10.52□□□□□ -0.73
UBR4-201ENST00000375218 KLHL33A6NCF5 533 aa10.52□□□□□ -0.73
UBR4-201ENST00000375218 VAC14Q08AM6 782 aa10.52□□□□□ -0.73
UBR4-201ENST00000375218 PTPN14Q15678 1187 aa10.52□□□□□ -0.73
UBR4-201ENST00000375218 KLHL10Q6JEL2 608 aa10.52□□□□□ -0.73
UBR4-201ENST00000375218 TAS1R3Q7RTX0 852 aa10.52□□□□□ -0.73
UBR4-201ENST00000375218 GABPB2Q8TAK5 448 aaPredicted RBP10.52□□□□□ -0.73
UBR4-201ENST00000375218 UNC5DQ6UXZ4 953 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 SMARCC1Q92922 1105 aaPredicted RBP10.51□□□□□ -0.73
UBR4-201ENST00000375218 POLR3CQ9BUI4 534 aaPredicted RBP10.51□□□□□ -0.73
UBR4-201ENST00000375218 RIC8AQ9NPQ8 531 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 GINM1Q9NU53 330 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 FBXL5Q9UKA1 691 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.51□□□□□ -0.73
UBR4-201ENST00000375218 METTL16Q86W50 562 aaKnown RBP10.51□□□□□ -0.73
UBR4-201ENST00000375218 MRFAP1L1Q96HT8 127 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 APBA2Q99767 749 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 SLX1AQ9BQ83 275 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 LZTS2Q9BRK4 669 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 HOMER2Q9NSB8 354 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 TMOD4Q9NZQ9 345 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 SCGB1D2O95969 90 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 MYL1P05976 194 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 MAPK1P28482 360 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 CHAF1AQ13111 956 aaPredicted RBP10.51□□□□□ -0.73
UBR4-201ENST00000375218 STAG2Q8N3U4 1231 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 SLC26A8Q96RN1 970 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 MAP3K14Q99558 947 aa10.51□□□□□ -0.73
UBR4-201ENST00000375218 EPB42P16452 691 aa10.5□□□□□ -0.73
UBR4-201ENST00000375218 GTF2A1P52655 376 aaPredicted RBP10.5□□□□□ -0.73
UBR4-201ENST00000375218 SEC13P55735 322 aa10.5□□□□□ -0.73
UBR4-201ENST00000375218 MYSM1Q5VVJ2 828 aa10.5□□□□□ -0.73
UBR4-201ENST00000375218 ENAMQ9NRM1 1142 aa10.5□□□□□ -0.73
UBR4-201ENST00000375218 FARP1Q9Y4F1 1045 aaPredicted RBP10.5□□□□□ -0.73
UBR4-201ENST00000375218 PIP5K1CO60331 668 aa10.5□□□□□ -0.73
UBR4-201ENST00000375218 ACAD8Q9UKU7 415 aa10.5□□□□□ -0.73
UBR4-201ENST00000375218 SPG7Q9UQ90 795 aa10.5□□□□□ -0.73
UBR4-201ENST00000375218 TSPAN7P41732 249 aa10.5□□□□□ -0.73
UBR4-201ENST00000375218 SNX5Q9Y5X3 404 aa10.5□□□□□ -0.73
UBR4-201ENST00000375218 ATP6V1E2Q96A05 226 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 SMAD5Q99717 465 aaKnown RBP10.49□□□□□ -0.73
UBR4-201ENST00000375218 C9orf78Q9NZ63 289 aaPredicted RBP10.49□□□□□ -0.73
UBR4-201ENST00000375218 PRKAB1Q9Y478 270 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 POLR3AO14802 1390 aaPredicted RBP10.49□□□□□ -0.73
UBR4-201ENST00000375218 LDLRAD1Q5T700 205 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 UCN2Q96RP3 112 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 SLC7A5P2Q9GIP4 190 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 SH3GLB2Q9NR46 395 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 FANCLQ9NW38 375 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 PPIP5K1Q6PFW1 1433 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 TNFAIP3P21580 790 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 HSD17B7P56937 341 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 SKA1Q96BD8 255 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 GTPBP4Q9BZE4 634 aaKnown RBP10.49□□□□□ -0.73
UBR4-201ENST00000375218 LUZP4Q9P127 313 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 TUBGCP6Q96RT7 1819 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 KIF16BQ96L93 1317 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 GLULP15104 373 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 HOXC13P31276 330 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 PDE3BQ13370 1112 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 CCDC158Q5M9N0 1113 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms