RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 HOXC9P31274 260 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 TRIM29Q14134 588 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 MTHFSDQ2M296 383 aaKnown RBP11.65□□□□□ -0.54
SCNM1-202ENST00000368905 LDLRAD1Q5T700 205 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 ANKRD45Q5TZF3 282 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 NUTM2GQ5VZR2 741 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 USP48Q86UV5 1035 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 RPAP2Q8IXW5 612 aaPredicted RBP11.65□□□□□ -0.54
SCNM1-202ENST00000368905 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 CHMP4CQ96CF2 233 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 AGAP3Q96P47 875 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 GMLQ99445 158 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 POLR3EQ9NVU0 708 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 USP25Q9UHP3 1055 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 MRPS23Q9Y3D9 190 aaKnown RBP11.65□□□□□ -0.54
SCNM1-202ENST00000368905 GNAT3A8MTJ3 354 aa11.64□□□□□ -0.55
SCNM1-202ENST00000368905 SLC4A3P48751 1232 aa11.64□□□□□ -0.55
SCNM1-202ENST00000368905 CLASRPQ8N2M8 674 aaKnown RBP11.64□□□□□ -0.55
SCNM1-202ENST00000368905 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCNM1-202ENST00000368905 CACNA1FO60840 1977 aa11.64□□□□□ -0.55
SCNM1-202ENST00000368905 XRCC5P13010 732 aaKnown RBP11.64□□□□□ -0.55
SCNM1-202ENST00000368905 TNNI2P48788 182 aa11.64□□□□□ -0.55
SCNM1-202ENST00000368905 MRPL58Q14197 206 aaKnown RBP11.64□□□□□ -0.55
SCNM1-202ENST00000368905 KCNH5Q8NCM2 988 aa11.64□□□□□ -0.55
SCNM1-202ENST00000368905 SMCR8Q8TEV9 937 aaPredicted RBP11.64□□□□□ -0.55
SCNM1-202ENST00000368905 STK31Q9BXU1 1019 aa11.64□□□□□ -0.55
SCNM1-202ENST00000368905 DHX36Q9H2U1 1008 aaKnown RBP11.64□□□□□ -0.55
SCNM1-202ENST00000368905 ADGRL3Q9HAR2 1447 aa11.63□□□□□ -0.55
SCNM1-202ENST00000368905 MYL3P08590 195 aa11.63□□□□□ -0.55
SCNM1-202ENST00000368905 SRGNP10124 158 aa11.63□□□□□ -0.55
SCNM1-202ENST00000368905 RPL17P18621 184 aaKnown RBP11.63□□□□□ -0.55
SCNM1-202ENST00000368905 CCT4P50991 539 aaKnown RBP11.63□□□□□ -0.55
SCNM1-202ENST00000368905 TMED1Q13445 227 aa11.63□□□□□ -0.55
SCNM1-202ENST00000368905 SLC4A8Q2Y0W8 1093 aa11.63□□□□□ -0.55
SCNM1-202ENST00000368905 ZCCHC8Q6NZY4 707 aaKnown RBP11.63□□□□□ -0.55
SCNM1-202ENST00000368905 PLPP6Q8IY26 295 aa11.63□□□□□ -0.55
SCNM1-202ENST00000368905 ZNF396Q96N95 335 aaPredicted RBP11.63□□□□□ -0.55
SCNM1-202ENST00000368905 MAP3K14Q99558 947 aa11.63□□□□□ -0.55
SCNM1-202ENST00000368905 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
SCNM1-202ENST00000368905 ENAMQ9NRM1 1142 aa11.63□□□□□ -0.55
SCNM1-202ENST00000368905 COMMD8Q9NX08 183 aa11.63□□□□□ -0.55
SCNM1-202ENST00000368905 PRKAB1Q9Y478 270 aa11.63□□□□□ -0.55
SCNM1-202ENST00000368905 LETM1O95202 739 aaPredicted RBP11.62□□□□□ -0.55
SCNM1-202ENST00000368905 CCDC159P0C7I6 412 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 RFC5P40937 340 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 CBLBQ13191 982 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 NFKBIBQ15653 356 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 CT47A1Q5JQC4 288 aaPredicted RBP11.62□□□□□ -0.55
SCNM1-202ENST00000368905 ALKBH2Q6NS38 261 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 ARL6IP6Q8N6S5 226 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 JARID2Q92833 1246 aaPredicted RBP11.62□□□□□ -0.55
SCNM1-202ENST00000368905 PAWRQ96IZ0 340 aaKnown RBP11.62□□□□□ -0.55
SCNM1-202ENST00000368905 TMEM87BQ96K49 555 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 TGIF2Q9GZN2 237 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 DNAJC25Q9H1X3 360 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 ACBD3Q9H3P7 528 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 RMI1Q9H9A7 625 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 LTBP4Q8N2S1 1624 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 KIF3CO14782 793 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 CTHP32929 405 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 GEMIN4P57678 1058 aaKnown RBP11.62□□□□□ -0.55
SCNM1-202ENST00000368905 GPSM2P81274 684 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 DDB1Q16531 1140 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 Q3C1V9 767 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 LMBRD2Q68DH5 695 aaPredicted RBP11.62□□□□□ -0.55
SCNM1-202ENST00000368905 SAMD14Q8IZD0 417 aaPredicted RBP11.62□□□□□ -0.55
SCNM1-202ENST00000368905 MIGA1Q8NAN2 632 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 DUSP9Q99956 384 aaKnown RBP11.62□□□□□ -0.55
SCNM1-202ENST00000368905 XPO4Q9C0E2 1151 aaKnown RBP11.62□□□□□ -0.55
SCNM1-202ENST00000368905 ZNF69Q9UC07 566 aa11.62□□□□□ -0.55
SCNM1-202ENST00000368905 MAP3K5Q99683 1374 aa11.61□□□□□ -0.55
SCNM1-202ENST00000368905 MYL1P05976 194 aa11.61□□□□□ -0.55
SCNM1-202ENST00000368905 NOS2P35228 1153 aa11.61□□□□□ -0.55
SCNM1-202ENST00000368905 CCDC30Q5VVM6 783 aa11.61□□□□□ -0.55
SCNM1-202ENST00000368905 ANKRD44Q8N8A2 993 aa11.61□□□□□ -0.55
SCNM1-202ENST00000368905 IP6K1Q92551 441 aa11.61□□□□□ -0.55
SCNM1-202ENST00000368905 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
SCNM1-202ENST00000368905 PPP2R3BQ9Y5P8 575 aa11.61□□□□□ -0.55
SCNM1-202ENST00000368905 MARF1Q9Y4F3 1742 aaKnown RBP11.61□□□□□ -0.55
SCNM1-202ENST00000368905 FIBPO43427 364 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 TRIM37O94972 964 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 CCDC158Q5M9N0 1113 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 JAKMIP3Q5VZ66 844 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 NFXL1Q6ZNB6 911 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 ERCC4Q92889 916 aaPredicted RBP11.6□□□□□ -0.55
SCNM1-202ENST00000368905 MRFAP1L1Q96HT8 127 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 PTPRHQ9HD43 1115 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 FBXO2Q9UK22 296 aaPredicted RBP11.6□□□□□ -0.55
SCNM1-202ENST00000368905 TMEM94Q12767 1356 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 HNRNPCP07910 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
SCNM1-202ENST00000368905 HOXC13P31276 330 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 TAF7Q15545 349 aaPredicted RBP11.6□□□□□ -0.55
SCNM1-202ENST00000368905 GRAMD1BQ3KR37 738 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 SPECC1Q5M775 1068 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
SCNM1-202ENST00000368905 SIRT2Q8IXJ6 389 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 EFCC1Q9HA90 598 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
SCNM1-202ENST00000368905 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms