RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 C14orf93Q9H972 538 aaKnown RBP9.76□□□□□ -0.85
SYNE1-206ENST00000367253 MAP3K11Q16584 847 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 GADL1Q6ZQY3 521 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 CEP128Q6ZU80 1094 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 TRIM11Q96F44 468 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 UPF3BQ9BZI7 483 aaKnown RBP9.75□□□□□ -0.85
SYNE1-206ENST00000367253 SMTNL1A8MU46 457 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 SEPT8Q92599 483 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 MPP4Q96JB8 637 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 TRIM4Q9C037 500 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 TAOK3Q9H2K8 898 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 LRRIQ1Q96JM4 1722 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 NBPF26B4DH59 902 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 ZRANB2O95218 330 aaKnown RBP eCLIP9.75□□□□□ -0.85
SYNE1-206ENST00000367253 LDHBP07195 334 aaKnown RBP9.75□□□□□ -0.85
SYNE1-206ENST00000367253 ZFYP08048 801 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-206ENST00000367253 MCM5P33992 734 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 PSMC4P43686 418 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 SKOR1P84550 965 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 PICALMQ13492 652 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 KCTD2Q14681 263 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 CFAP58Q5T655 872 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 RUFY3Q7L099 469 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 ZNF830Q96NB3 372 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-206ENST00000367253 NUP62CLQ9H1M0 184 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 SLC24A3Q9HC58 644 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 U3KPZ7 1027 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-206ENST00000367253 ADGRF5Q8IZF2 1346 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 PRAG1Q86YV5 1406 aa9.75□□□□□ -0.85
SYNE1-206ENST00000367253 SCAF11Q99590 1463 aaKnown RBP9.75□□□□□ -0.85
SYNE1-206ENST00000367253 FRMD3A2A2Y4 597 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 RLBP1P12271 317 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 KIAA1841Q6NSI8 718 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 FEZ2Q9UHY8 353 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-206ENST00000367253 BLVRAP53004 296 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 KIF4BQ2VIQ3 1234 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 WDR75Q8IWA0 830 aaKnown RBP9.74□□□□□ -0.85
SYNE1-206ENST00000367253 SYCP3Q8IZU3 236 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 DDX27Q96GQ7 796 aaKnown RBP9.74□□□□□ -0.85
SYNE1-206ENST00000367253 DCAF5Q96JK2 942 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 EFCC1Q9HA90 598 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 ZFYVE16Q7Z3T8 1539 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 ACTN2P35609 894 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 PRIMPOLQ96LW4 560 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 NOS1P29475 1434 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 MAP3K7O43318 606 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 NBPF7P0C2Y1 421 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-206ENST00000367253 RANBP1P43487 201 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 KCNJ6P48051 423 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 ME1P48163 572 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 BASP1P80723 227 aaKnown RBP9.74□□□□□ -0.85
SYNE1-206ENST00000367253 SREBF2Q12772 1141 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 SPECC1Q5M775 1068 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 NBPF15Q8N660 670 aa9.74□□□□□ -0.85
SYNE1-206ENST00000367253 KDM5DQ9BY66 1539 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 CC2D1AQ6P1N0 951 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-206ENST00000367253 ATP6V1E2Q96A05 226 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 TSNARE1Q96NA8 513 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 PPIP5K1Q6PFW1 1433 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 K7ELQ4 463 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-206ENST00000367253 TBCAO75347 108 aaKnown RBP9.73□□□□□ -0.85
SYNE1-206ENST00000367253 CCDC6Q16204 474 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 MFSD14CQ5VZR4 134 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 UNC5CLQ8IV45 518 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 TMCO5AQ8N6Q1 288 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 FTOQ9C0B1 505 aaKnown RBP eCLIP9.73□□□□□ -0.85
SYNE1-206ENST00000367253 SYNCQ9H7C4 482 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 AFF2P51816 1311 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 CASTP20810 708 aaKnown RBP9.73□□□□□ -0.85
SYNE1-206ENST00000367253 MSL1Q68DK7 614 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 NAA16Q6N069 864 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-206ENST00000367253 TTLL6Q8N841 843 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 RAB23Q9ULC3 237 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 UBE4AQ14139 1066 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.73□□□□□ -0.85
SYNE1-206ENST00000367253 SPATA17Q96L03 361 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 GLT8D2Q9H1C3 349 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 SLC8A2Q9UPR5 921 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 SPATA31A6Q5VVP1 1343 aa9.73□□□□□ -0.85
SYNE1-206ENST00000367253 APAF1O14727 1248 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 CEBPZQ03701 1054 aaKnown RBP9.72□□□□□ -0.85
SYNE1-206ENST00000367253 KIF5AQ12840 1032 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 WAPLQ7Z5K2 1190 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 CCDC144CPQ8IYA2 1237 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 CDC42BPBQ9Y5S2 1711 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 ACTN1P12814 892 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 ZNF449Q6P9G9 518 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 PPFIA3O75145 1194 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 CALML3P27482 149 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 PRPHP41219 470 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 MAP3K7CLP57077 242 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 AMPD3Q01432 767 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 HOOK3Q86VS8 718 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 KCNG4Q8TDN1 519 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 HECW2Q9P2P5 1572 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 PLEKHH1Q9ULM0 1364 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 NEMFO60524 1076 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 ELF1P32519 619 aa9.72□□□□□ -0.85
SYNE1-206ENST00000367253 PAFAH1B1P43034 410 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms