RNA–Protein interactions for RNA: ENST00000361320.4

LRRTM3-201, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM3, Length 4,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-201ENST00000361320 COL23A1Q86Y22 540 aaPredicted RBP8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 CPXCR1Q8N123 301 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 EHMT1Q9H9B1 1298 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 ARHGEF10LQ9HCE6 1279 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 BMP2KQ9NSY1 1161 aaPredicted RBP8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 WDR33Q9C0J8 1336 aaKnown RBP8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 B4E1Z4 1266 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 USP17L12C9JPN9 530 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 USP17L21D6R901 530 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 H7C1W4 665 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 RXRAP19793 462 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 BTDP43251 543 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 KRT85P78386 507 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 BSDC1Q9NW68 430 aaPredicted RBP8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 FBXO3Q9UK99 471 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 IVNS1ABPQ9Y6Y0 642 aa8.21□□□□□ -1.1
LRRTM3-201ENST00000361320 GNAQP50148 359 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 DCAF15Q66K64 600 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 CEP89Q96ST8 783 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 MPHOSPH6Q99547 160 aaKnown RBP8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 GPCPD1Q9NPB8 672 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 SH2B1Q9NRF2 756 aaPredicted RBP8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 USP17L3A6NCW0 530 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 USP17L4A6NCW7 530 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 CHMLP26374 656 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 IRX3P78415 501 aaPredicted RBP8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 TBC1D10BQ4KMP7 808 aaPredicted RBP8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 USP17L1Q7RTZ2 530 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 CERS3Q8IU89 383 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 SDR42E1Q8WUS8 393 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 ATP5JP18859 108 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 HMGN5P82970 282 aaKnown RBP8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 TRAF1Q13077 416 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 NKX1-1Q15270 411 aaPredicted RBP8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 EPHA10Q5JZY3 1008 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 PI16Q6UXB8 463 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 NECAB1Q8N987 351 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 HELLSQ9NRZ9 838 aa8.2□□□□□ -1.1
LRRTM3-201ENST00000361320 PDE6AP16499 860 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 MTFR1LQ9H019 292 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 MROH2AA6NES4 1674 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 GRIN3BO60391 1043 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 PRPF40AO75400 957 aaKnown RBP8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 CAMTA2O94983 1202 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 DPEP1P16444 411 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 EPS15P42566 896 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 PTPN12Q05209 780 aaKnown RBP8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 DIXDC1Q155Q3 683 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 SMARCC2Q8TAQ2 1214 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 DBNLQ9UJU6 430 aaKnown RBP8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 MINPP1Q9UNW1 487 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 NAPAP54920 295 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 Q6ZUG5 572 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 FAM13BQ9NYF5 915 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 SLC1A4P43007 532 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 MATR3P43243 847 aaKnown RBP eCLIP8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 CSRNP1Q96S65 589 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 ISCA1Q9BUE6 129 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 COA1Q9GZY4 146 aa8.19□□□□□ -1.1
LRRTM3-201ENST00000361320 TPM1P09493 284 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 SKOR2Q2VWA4 1001 aaPredicted RBP8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 CREB3L3Q68CJ9 461 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 SPATA32Q96LK8 384 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 CIAO1O76071 339 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 CTDSPL2Q05D32 466 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 OLFM4Q6UX06 510 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 PAGR1Q9BTK6 254 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 TLR7Q9NYK1 1049 aaKnown RBP8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 MEGF6O75095 1541 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 TFAP4Q01664 338 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 SP4Q02446 784 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 SUPT20HL1Q3ZLR7 823 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 CKAP2LQ8IYA6 745 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 CFAP45Q9UL16 551 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 ZNF521Q96K83 1311 aa8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 USP42Q9H9J4 1324 aaKnown RBP8.18□□□□□ -1.1
LRRTM3-201ENST00000361320 LIG1P18858 919 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 FAM47AQ5JRC9 791 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 NEURL4Q96JN8 1562 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 RAB34Q9BZG1 259 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 HOMER2Q9NSB8 354 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 COL5A2P05997 1499 aaPredicted RBP8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 RNF123Q5XPI4 1314 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 CNTNAP4Q9C0A0 1308 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 GOLGA6L3A6NEY3 463 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 SPDYE3A6NKU9 549 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 PARP1P09874 1014 aaKnown RBP8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 TMEM266Q2M3C6 531 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 PTF1AQ7RTS3 328 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 RRP36Q96EU6 259 aaKnown RBP8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 SEC62Q99442 399 aaKnown RBP8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 CLIP2Q9UDT6 1046 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 ECE2O60344 883 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 SASH1O94885 1247 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 BAG4O95429 457 aaKnown RBP8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 CACNB3P54284 484 aa8.17□□□□□ -1.1
LRRTM3-201ENST00000361320 APOBRQ0VD83 1088 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms