RNA–Protein interactions for RNA: ENST00000361303.7

LDLRAD4-202, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,086 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-202ENST00000361303 TUBB4BP68371 445 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 KCNG1Q9UIX4 513 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 TNFAIP1Q13829 316 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 NMIQ13287 307 aaPredicted RBP12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 CFAP58Q5T655 872 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 TSHZ3Q63HK5 1081 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 GIMAP7Q8NHV1 300 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 TTC14Q96N46 770 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 TRMT1Q9NXH9 659 aaKnown RBP12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 DNM2P50570 870 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 TBC1D22AQ8WUA7 517 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 MTHFSDQ2M296 383 aaKnown RBP12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 SV2BQ7L1I2 683 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 TSGA10Q9BZW7 698 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 TBX22Q9Y458 520 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 PAXBP1Q9Y5B6 917 aa12.14□□□□□ -0.47
LDLRAD4-202ENST00000361303 PLCB3Q01970 1234 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 ARHGEF6Q15052 776 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 AZI2Q9H6S1 392 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 KRT86O43790 486 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 PLCD1P51178 756 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 KMT5BQ4FZB7 885 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 RNF187Q5TA31 235 aaPredicted RBP12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 LZTS2Q9BRK4 669 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 CSRNP2Q9H175 543 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 USP21Q9UK80 565 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 FAM169AQ9Y6X4 670 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 SPTLC2O15270 562 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 HOXC9P31274 260 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 SP4Q02446 784 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 ATL3Q6DD88 541 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 KIF5AQ12840 1032 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 IQUBQ8NA54 791 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 ATP6V0A2Q9Y487 856 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 ADCY5O95622 1261 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 GNG11P61952 73 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 TFCP2Q12800 502 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 DHX58Q96C10 678 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 AS3MTQ9HBK9 375 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 CCDC63Q8NA47 563 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
LDLRAD4-202ENST00000361303 TUBB4AP04350 444 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 HSPA2P54652 639 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 TRPC3Q13507 836 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 MAP7D1Q3KQU3 841 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 CCDC184Q52MB2 194 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 NOX5Q96PH1 765 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 LRRC2Q9BYS8 371 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 DDX21Q9NR30 783 aaKnown RBP eCLIP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 CALUO43852 315 aaPredicted RBP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 SH3BP5O60239 455 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 C20orf194Q5TEA3 1177 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 DHX32Q7L7V1 743 aaKnown RBP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 TMX3Q96JJ7 454 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 MTUS1Q9ULD2 1270 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 CSADQ9Y600 493 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 ATP10AO60312 1499 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 MAST1Q9Y2H9 1570 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 CEP135Q66GS9 1140 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 SAP30BPQ9UHR5 308 aaKnown RBP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 V9GYY5 206 aaPredicted RBP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 STK10O94804 968 aaKnown RBP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 GJC1P36383 396 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 HELBQ8NG08 1087 aaPredicted RBP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 C16orf45Q96MC5 204 aaPredicted RBP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 TMEM110-MUSTN1A8MSY1 372 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 ITGA6P23229 1130 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 RNF34Q969K3 372 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 BICC1Q9H694 974 aaKnown RBP12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 PBRM1Q86U86 1689 aa12.12□□□□□ -0.47
LDLRAD4-202ENST00000361303 CTAGE9A4FU28 777 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 PABPC4Q13310 644 aaKnown RBP eCLIP12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 BIRC3Q13489 604 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 TMX1Q9H3N1 280 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 USP48Q86UV5 1035 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 SBNO1A3KN83 1393 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 VWA3BQ502W6 1294 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 TMEM87BQ96K49 555 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 CCDC42Q96M95 316 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 APBA3O96018 575 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 MARCKSP29966 332 aaPredicted RBP12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 ALDH3A1P30838 453 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 NACA2Q9H009 215 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 MROH5Q6ZUA9 1318 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 SMCR8Q8TEV9 937 aaPredicted RBP12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 POLR3AO14802 1390 aaPredicted RBP12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 PRAG1Q86YV5 1406 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 CFAP57Q96MR6 1250 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
LDLRAD4-202ENST00000361303 ADAMTS12P58397 1594 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms