RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 HSD3B7Q9H2F3 369 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 HPS5Q9UPZ3 1129 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 MAP3K15Q6ZN16 1313 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 PNMA6AP0CW24 399 aaPredicted RBP13.19□□□□□ -0.3
CAPN9-202ENST00000354537 NCOA7Q8NI08 942 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 NAP1L2Q9ULW6 460 aaPredicted RBP13.19□□□□□ -0.3
CAPN9-202ENST00000354537 DDX60Q8IY21 1712 aaKnown RBP13.19□□□□□ -0.3
CAPN9-202ENST00000354537 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 ARHGAP6O43182 974 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 PRC1O43663 620 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 TADA3O75528 432 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 UBASH3AP57075 661 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 REXO1L1PQ8IX06 675 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
CAPN9-202ENST00000354537 UBXN6Q9BZV1 441 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 AXIN2Q9Y2T1 843 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 TRPM3Q9HCF6 1732 aaPredicted RBP13.18□□□□□ -0.3
CAPN9-202ENST00000354537 KLF18A0A0U1RQI7 1052 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 M0R2C6 588 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 CPLX1O14810 134 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 CDKL5O76039 1030 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 SYKP43405 635 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 TEX35Q5T0J7 233 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.18□□□□□ -0.3
CAPN9-202ENST00000354537 LAMB4A4D0S4 1761 aa13.18□□□□□ -0.3
CAPN9-202ENST00000354537 CPDO75976 1380 aa13.17□□□□□ -0.3
CAPN9-202ENST00000354537 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
CAPN9-202ENST00000354537 PLA2G4AP47712 749 aa13.17□□□□□ -0.3
CAPN9-202ENST00000354537 OLFM4Q6UX06 510 aa13.17□□□□□ -0.3
CAPN9-202ENST00000354537 CWC25Q9NXE8 425 aaPredicted RBP13.17□□□□□ -0.3
CAPN9-202ENST00000354537 GOLGA8BA8MQT2 603 aa13.17□□□□□ -0.3
CAPN9-202ENST00000354537 OSBP2Q969R2 916 aa13.17□□□□□ -0.3
CAPN9-202ENST00000354537 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
CAPN9-202ENST00000354537 CUTAO60888 179 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 SERPINC1P01008 464 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 LMOD1P29536 600 aaPredicted RBP13.16□□□□□ -0.3
CAPN9-202ENST00000354537 TIMM10P62072 90 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 GPR161Q8N6U8 529 aaKnown RBP13.16□□□□□ -0.3
CAPN9-202ENST00000354537 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 A0A0G2JLW4 131 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 A0A1B0GUL7 405 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 ATP5J2-PTCD1G3V325 749 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
CAPN9-202ENST00000354537 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
CAPN9-202ENST00000354537 TOP1P11387 765 aaKnown RBP13.16□□□□□ -0.3
CAPN9-202ENST00000354537 TBX2Q13207 712 aaPredicted RBP13.16□□□□□ -0.3
CAPN9-202ENST00000354537 PTPAQ15257 358 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 TTLL5Q6EMB2 1281 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 CHST3Q7LGC8 479 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 APPBP2Q92624 585 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.16□□□□□ -0.3
CAPN9-202ENST00000354537 HOOK1Q9UJC3 728 aaKnown RBP13.16□□□□□ -0.3
CAPN9-202ENST00000354537 PARP3Q9Y6F1 533 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 ZMYM6O95789 1325 aa13.16□□□□□ -0.3
CAPN9-202ENST00000354537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
CAPN9-202ENST00000354537 BIN1O00499 593 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 STX10O60499 249 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 FGAP02671 866 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 JAKMIP3Q5VZ66 844 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 OTUD7BQ6GQQ9 843 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
CAPN9-202ENST00000354537 RALYLQ86SE5 291 aaKnown RBP13.15□□□□□ -0.3
CAPN9-202ENST00000354537 C19orf44Q9H6X5 657 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 PODXL2Q9NZ53 605 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 NWD2Q9ULI1 1742 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 C4AP0C0L4 1744 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 C4BP0C0L5 1744 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 FOXP2O15409 715 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 ANTXR2P58335 489 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 TUBB4BP68371 445 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 SLC20A2Q08357 652 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 TMEM139Q8IV31 216 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 CEP126Q9P2H0 1117 aa13.15□□□□□ -0.3
CAPN9-202ENST00000354537 ATP1A3P13637 1013 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 CFAP100Q494V2 611 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 CT47A1Q5JQC4 288 aaPredicted RBP13.14□□□□□ -0.31
CAPN9-202ENST00000354537 CCDC102BQ68D86 513 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 SHC4Q6S5L8 630 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 DACH1Q9UI36 760 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 PPP2R2CQ9Y2T4 447 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 MROH7-TTC4A0A0A0MT08 1334 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 VWA3AA6NCI4 1184 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 TULP2O00295 520 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 ZNF213O14771 459 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 URI1O94763 535 aaPredicted RBP13.14□□□□□ -0.31
CAPN9-202ENST00000354537 GLI3P10071 1580 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 TXLNBQ8N3L3 684 aa13.14□□□□□ -0.31
CAPN9-202ENST00000354537 NPHP1O15259 732 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 CASQ1P31415 396 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 RSRC2Q7L4I2 434 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms