RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PPFIA3O75145 1194 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 MAP3K9P80192 1104 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 TBC1D9BQ66K14 1250 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 CCDC150Q8NCX0 1101 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 SMC2O95347 1197 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 BMP2KLQ5H9B9 411 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 BICD1Q96G01 975 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 IQCA1LA6NCM1 817 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 CNGA1P29973 690 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 DCTPP1Q9H773 170 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 GPBP1L1Q9HC44 474 aaPredicted RBP14.79□□□□□ -0.04
LIN54-201ENST00000340417 RBM27Q9P2N5 1060 aaKnown RBP14.79□□□□□ -0.04
LIN54-201ENST00000340417 BTDP43251 543 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 SLC15A2Q16348 729 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 TBC1D9Q6ZT07 1266 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 BACH1O14867 736 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 SLC1A4P43007 532 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 MKRN3Q13064 507 aaKnown RBP14.79□□□□□ -0.04
LIN54-201ENST00000340417 SYNE4Q8N205 404 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 APPBP2Q92624 585 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 IREB2P48200 963 aaKnown RBP14.79□□□□□ -0.04
LIN54-201ENST00000340417 ZKSCAN3Q9BRR0 538 aa14.79□□□□□ -0.04
LIN54-201ENST00000340417 PRPF40AO75400 957 aaKnown RBP14.79□□□□□ -0.04
LIN54-201ENST00000340417 A0A0G2JLW4 131 aa14.78□□□□□ -0.04
LIN54-201ENST00000340417 HOMER2Q9NSB8 354 aa14.78□□□□□ -0.04
LIN54-201ENST00000340417 STXBP4Q6ZWJ1 553 aa14.78□□□□□ -0.04
LIN54-201ENST00000340417 SLC16A10Q8TF71 515 aa14.78□□□□□ -0.04
LIN54-201ENST00000340417 SLC10A4Q96EP9 437 aa14.78□□□□□ -0.04
LIN54-201ENST00000340417 TSG101Q99816 390 aa14.78□□□□□ -0.04
LIN54-201ENST00000340417 DIP2AQ14689 1571 aa14.78□□□□□ -0.04
LIN54-201ENST00000340417 ZNF532Q9HCE3 1301 aa14.78□□□□□ -0.04
LIN54-201ENST00000340417 CCDC70Q6NSX1 233 aa14.78□□□□□ -0.04
LIN54-201ENST00000340417 ZNF277Q9NRM2 450 aaPredicted RBP14.78□□□□□ -0.04
LIN54-201ENST00000340417 NCAPD2Q15021 1401 aa14.77□□□□□ -0.04
LIN54-201ENST00000340417 SEPT11Q9NVA2 429 aaKnown RBP14.77□□□□□ -0.04
LIN54-201ENST00000340417 LETM1O95202 739 aaPredicted RBP14.77□□□□□ -0.04
LIN54-201ENST00000340417 CYP19A1P11511 503 aaPredicted RBP14.77□□□□□ -0.04
LIN54-201ENST00000340417 CCAR2Q8N163 923 aaKnown RBP14.77□□□□□ -0.04
LIN54-201ENST00000340417 DCCP43146 1447 aa14.77□□□□□ -0.05
LIN54-201ENST00000340417 NSMFQ6X4W1 530 aa14.77□□□□□ -0.05
LIN54-201ENST00000340417 PCDHB15Q9Y5E8 787 aa14.77□□□□□ -0.05
LIN54-201ENST00000340417 PNPLA6Q8IY17 1366 aa14.77□□□□□ -0.05
LIN54-201ENST00000340417 GPAA1O43292 621 aa14.77□□□□□ -0.05
LIN54-201ENST00000340417 IGHDP01880 384 aa14.77□□□□□ -0.05
LIN54-201ENST00000340417 SYCP3Q8IZU3 236 aa14.77□□□□□ -0.05
LIN54-201ENST00000340417 LAMC1P11047 1609 aa14.77□□□□□ -0.05
LIN54-201ENST00000340417 PRDM1O75626 825 aa14.77□□□□□ -0.05
LIN54-201ENST00000340417 PREX1Q8TCU6 1659 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 NOP56O00567 594 aaKnown RBP14.76□□□□□ -0.05
LIN54-201ENST00000340417 KIF20AO95235 890 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 CHRNA5P30532 468 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 LRRC24Q50LG9 513 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 CCDC102BQ68D86 513 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 ZBTB21Q9ULJ3 1066 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 OSBPP22059 807 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 UBA7P41226 1012 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 MBD3O95983 291 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 RLBP1P12271 317 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 BEND3Q5T5X7 828 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 CCDC174Q6PII3 467 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 FCHSD1Q86WN1 690 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 KIFC2Q96AC6 838 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 TNMDQ9H2S6 317 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 USP31Q70CQ4 1352 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 HLFQ16534 295 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 IQSEC2Q5JU85 1478 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 CHST3Q7LGC8 479 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 ZBTB40Q9NUA8 1239 aa14.76□□□□□ -0.05
LIN54-201ENST00000340417 ZBTB7BO15156 539 aaPredicted RBP14.75□□□□□ -0.05
LIN54-201ENST00000340417 TBCAO75347 108 aaKnown RBP14.75□□□□□ -0.05
LIN54-201ENST00000340417 SMARCE1Q969G3 411 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 NAP1L5Q96NT1 182 aaPredicted RBP14.75□□□□□ -0.05
LIN54-201ENST00000340417 TECPR2O15040 1411 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 PKD2L1Q9P0L9 805 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 USP17L8P0C7I0 530 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 MYCLP12524 364 aaPredicted RBP14.75□□□□□ -0.05
LIN54-201ENST00000340417 GNA11P29992 359 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 CERKLQ49MI3 558 aaPredicted RBP14.75□□□□□ -0.05
LIN54-201ENST00000340417 TBC1D10BQ4KMP7 808 aaPredicted RBP14.75□□□□□ -0.05
LIN54-201ENST00000340417 Q6ZUG5 572 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 PDE8BO95263 885 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 AMPD3Q01432 767 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 NFIXQ14938 502 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 AOC3Q16853 763 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 CSRNP1Q96S65 589 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 ESYT1Q9BSJ8 1104 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 ALG1Q9BT22 464 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 COA1Q9GZY4 146 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 IDEP14735 1019 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 TCEANC2Q96MN5 208 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 PLEKHF1Q96S99 279 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 RBM28Q9NW13 759 aaKnown RBP14.75□□□□□ -0.05
LIN54-201ENST00000340417 PTPRUQ92729 1446 aa14.75□□□□□ -0.05
LIN54-201ENST00000340417 POTEJP0CG39 1038 aa14.74□□□□□ -0.05
LIN54-201ENST00000340417 ZNHIT6Q9NWK9 470 aaKnown RBP14.74□□□□□ -0.05
LIN54-201ENST00000340417 BRIP1Q9BX63 1249 aa14.74□□□□□ -0.05
LIN54-201ENST00000340417 TSHZ2Q9NRE2 1034 aa14.74□□□□□ -0.05
LIN54-201ENST00000340417 ARPP21Q9UBL0 812 aaPredicted RBP14.74□□□□□ -0.05
LIN54-201ENST00000340417 PNMA6EA0A0J9YXQ4 647 aa14.74□□□□□ -0.05
LIN54-201ENST00000340417 NEBLO76041 1014 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms