RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 FMNL3Q8IVF7 1028 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 CCAR1Q8IX12 1150 aaKnown RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 OTUD6BQ8N6M0 293 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 NGDNQ8NEJ9 315 aaKnown RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 ZSCAN31Q96LW9 406 aaPredicted RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 XPO4Q9C0E2 1151 aaKnown RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 GBP3Q9H0R5 595 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 SBNO1A3KN83 1393 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 N4BP1O75113 896 aaKnown RBP10.65□□□□□ -0.7
RPGR-202ENST00000339363 SSBP05455 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
RPGR-202ENST00000339363 HNRNPH1P31943 449 aaKnown RBP10.65□□□□□ -0.7
RPGR-202ENST00000339363 GBP2P32456 591 aaPredicted RBP10.65□□□□□ -0.7
RPGR-202ENST00000339363 AP1ARQ63HQ0 302 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 CTCFLQ8NI51 663 aaPredicted RBP10.65□□□□□ -0.7
RPGR-202ENST00000339363 CRACR2AQ9BSW2 395 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 PSDA5PKW4 1024 aaPredicted RBP10.65□□□□□ -0.7
RPGR-202ENST00000339363 GCKP35557 465 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 CHST3Q7LGC8 479 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 NOC3LQ8WTT2 800 aaKnown RBP10.65□□□□□ -0.7
RPGR-202ENST00000339363 TECPR2O15040 1411 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 MAP3K5Q99683 1374 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 TULP1O00294 542 aaPredicted RBP10.65□□□□□ -0.7
RPGR-202ENST00000339363 FANCGO15287 622 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 TOP1P11387 765 aaKnown RBP10.65□□□□□ -0.7
RPGR-202ENST00000339363 CHMP4BP1P59074 171 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 GUCY1B3Q02153 619 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 HOMEZQ8IX15 550 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 MAP4K1Q92918 833 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 SGSM3Q96HU1 749 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
RPGR-202ENST00000339363 ODF2LQ9ULJ1 636 aa10.65□□□□□ -0.7
RPGR-202ENST00000339363 STOX1Q6ZVD7 989 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 TOPAZ1Q8N9V7 1692 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 ADD1P35611 737 aaKnown RBP10.64□□□□□ -0.71
RPGR-202ENST00000339363 SWT1Q5T5J6 900 aaKnown RBP10.64□□□□□ -0.71
RPGR-202ENST00000339363 NKX2-3Q8TAU0 364 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 NCOA5Q9HCD5 579 aaKnown RBP10.64□□□□□ -0.71
RPGR-202ENST00000339363 SH2B1Q9NRF2 756 aaPredicted RBP10.64□□□□□ -0.71
RPGR-202ENST00000339363 GNL3LQ9NVN8 582 aaKnown RBP10.64□□□□□ -0.71
RPGR-202ENST00000339363 CFAP45Q9UL16 551 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 AMOTL2Q9Y2J4 779 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 A0A1B0GUA9 196 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 CCDC151A5D8V7 595 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 CTAGE5O15320 804 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 BRD3Q15059 726 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 HSP90AA4PQ58FG1 418 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 RABGGTAQ92696 567 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 GDAP1L1Q96MZ0 367 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 FUT8Q9BYC5 575 aa10.64□□□□□ -0.71
RPGR-202ENST00000339363 ZSCAN16Q9H4T2 348 aaPredicted RBP10.64□□□□□ -0.71
RPGR-202ENST00000339363 PXDNQ92626 1479 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 GOLGA8FQ08AF8 430 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 GOLGA8DPQ0D2H9 430 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 SEMA3FQ13275 785 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 POTEDQ86YR6 584 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 KCNB2Q92953 911 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 SCLT1Q96NL6 688 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 ECHDC1Q9NTX5 307 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 MARF1Q9Y4F3 1742 aaKnown RBP10.63□□□□□ -0.71
RPGR-202ENST00000339363 ARID4AP29374 1257 aaPredicted RBP10.63□□□□□ -0.71
RPGR-202ENST00000339363 TXLNAP40222 546 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 OTUD7BQ6GQQ9 843 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 ILDR1Q86SU0 546 aaPredicted RBP10.63□□□□□ -0.71
RPGR-202ENST00000339363 FSIP1Q8NA03 581 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.63□□□□□ -0.71
RPGR-202ENST00000339363 AOX1Q06278 1338 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 CTDNEP1O95476 244 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 ELF1P32519 619 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 IQCB1Q15051 598 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 LRRC31Q6UY01 552 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 BCAS4Q8TDM0 211 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 CABS1Q96KC9 395 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 RUFY1Q96T51 708 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 TRIM6Q9C030 488 aaPredicted RBP10.63□□□□□ -0.71
RPGR-202ENST00000339363 FAM169AQ9Y6X4 670 aa10.63□□□□□ -0.71
RPGR-202ENST00000339363 RGPD2P0DJD1 1756 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 POTEB2H3BUK9 544 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 SLC39A6Q13433 755 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 RAB11FIP4Q86YS3 637 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 BRF1Q92994 677 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 MPHOSPH8Q99549 860 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 SUGCTQ9HAC7 445 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 LZTFL1Q9NQ48 299 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 SAMM50Q9Y512 469 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 TTC41PQ6P2S7 1318 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 PHLPP2Q6ZVD8 1323 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 LMTK3Q96Q04 1460 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 IGKV5-2P06315 115 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 UBASH3AP57075 661 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 TRDNQ13061 729 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 ANKRD18AQ8IVF6 992 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 RUFY2Q8WXA3 655 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 IRAK4Q9NWZ3 460 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 IMPACTQ9P2X3 320 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 TMEM2Q9UHN6 1383 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 GLRX3O76003 335 aaKnown RBP10.62□□□□□ -0.71
RPGR-202ENST00000339363 PAX7P23759 505 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 ABTB2Q8N961 1025 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 IQUBQ8NA54 791 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 FAM71BQ8TC56 605 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms