RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 MYH6P13533 1939 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.53□□□□□ -1.04
NPHP1-201ENST00000316534 TRAK2O60296 914 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 BCAMP50895 628 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 NBPF5PQ86XG9 351 aaPredicted RBP8.53□□□□□ -1.04
NPHP1-201ENST00000316534 FLAD1Q8NFF5 587 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 CCDC85AQ96PX6 553 aaPredicted RBP8.53□□□□□ -1.04
NPHP1-201ENST00000316534 BRIP1Q9BX63 1249 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 HPS5Q9UPZ3 1129 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 ELP1O95163 1332 aa8.52□□□□□ -1.04
NPHP1-201ENST00000316534 PCP11498 1178 aaKnown RBP8.52□□□□□ -1.04
NPHP1-201ENST00000316534 SYT1P21579 422 aa8.52□□□□□ -1.04
NPHP1-201ENST00000316534 RFC4P35249 363 aa8.52□□□□□ -1.04
NPHP1-201ENST00000316534 ZNF445P59923 1031 aa8.52□□□□□ -1.04
NPHP1-201ENST00000316534 FAM182BQ5T319 152 aa8.52□□□□□ -1.04
NPHP1-201ENST00000316534 SLX4Q8IY92 1834 aa8.52□□□□□ -1.05
NPHP1-201ENST00000316534 ARFGEF1Q9Y6D6 1849 aa8.52□□□□□ -1.05
NPHP1-201ENST00000316534 FKBP4Q02790 459 aaKnown RBP eCLIP8.52□□□□□ -1.05
NPHP1-201ENST00000316534 ADGRA1Q86SQ6 560 aa8.52□□□□□ -1.05
NPHP1-201ENST00000316534 NKX2-3Q8TAU0 364 aa8.52□□□□□ -1.05
NPHP1-201ENST00000316534 SLC9C2Q5TAH2 1124 aa8.52□□□□□ -1.05
NPHP1-201ENST00000316534 Q6ZUG5 572 aa8.52□□□□□ -1.05
NPHP1-201ENST00000316534 SMIM5Q71RC9 77 aa8.52□□□□□ -1.05
NPHP1-201ENST00000316534 XDHP47989 1333 aa8.52□□□□□ -1.05
NPHP1-201ENST00000316534 FAM205AQ6ZU69 1335 aa8.52□□□□□ -1.05
NPHP1-201ENST00000316534 STX6O43752 255 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 F13A1P00488 732 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 SCRN1Q12765 414 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 MAP3K12Q12852 859 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 TBC1D10CQ8IV04 446 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 NSUN7Q8NE18 718 aaKnown RBP8.51□□□□□ -1.05
NPHP1-201ENST00000316534 NSUN4Q96CB9 384 aaKnown RBP8.51□□□□□ -1.05
NPHP1-201ENST00000316534 FER1L6Q2WGJ9 1857 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 PDIA3P30101 505 aaKnown RBP8.51□□□□□ -1.05
NPHP1-201ENST00000316534 LIFRP42702 1097 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 IMMTQ16891 758 aaKnown RBP8.51□□□□□ -1.05
NPHP1-201ENST00000316534 SBK1Q52WX2 424 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 SPRYD3Q8NCJ5 442 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 IGDCC4Q8TDY8 1250 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 CHMP4CQ96CF2 233 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 FAM163AQ96GL9 167 aaPredicted RBP8.51□□□□□ -1.05
NPHP1-201ENST00000316534 MORC2Q9Y6X9 1032 aaPredicted RBP8.51□□□□□ -1.05
NPHP1-201ENST00000316534 SH2B2O14492 632 aaPredicted RBP8.51□□□□□ -1.05
NPHP1-201ENST00000316534 BBOX1O75936 387 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 GJB2P29033 226 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 PPP4CP60510 307 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 IFNL3Q8IZI9 196 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 GPT2Q8TD30 523 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 MYH8P13535 1937 aa8.51□□□□□ -1.05
NPHP1-201ENST00000316534 COL2A1P02458 1487 aaPredicted RBP8.5□□□□□ -1.05
NPHP1-201ENST00000316534 SERPINB2P05120 415 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 NOVP48745 357 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 GORABQ5T7V8 394 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 NAA16Q6N069 864 aaPredicted RBP8.5□□□□□ -1.05
NPHP1-201ENST00000316534 CNBD1Q8NA66 436 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 HELBQ8NG08 1087 aaPredicted RBP8.5□□□□□ -1.05
NPHP1-201ENST00000316534 CAMKK2Q96RR4 588 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.5□□□□□ -1.05
NPHP1-201ENST00000316534 STK36Q9NRP7 1315 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 WTIPA6NIX2 430 aaPredicted RBP8.5□□□□□ -1.05
NPHP1-201ENST00000316534 KLRK1P26718 216 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 TTLL5Q6EMB2 1281 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 TMEM87BQ96K49 555 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 SCN9AQ15858 1988 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 ADD1P35611 737 aaKnown RBP8.5□□□□□ -1.05
NPHP1-201ENST00000316534 SP8Q8IXZ3 490 aa8.5□□□□□ -1.05
NPHP1-201ENST00000316534 GNL3LQ9NVN8 582 aaKnown RBP8.5□□□□□ -1.05
NPHP1-201ENST00000316534 SNAP23O00161 211 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 TRIM37O94972 964 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 FKBP1AP62942 108 aaKnown RBP8.49□□□□□ -1.05
NPHP1-201ENST00000316534 RESTQ13127 1097 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 COL23A1Q86Y22 540 aaPredicted RBP8.49□□□□□ -1.05
NPHP1-201ENST00000316534 LCORLQ8N3X6 602 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 NCOA7Q8NI08 942 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 RTFDC1Q9BY42 306 aaPredicted RBP8.49□□□□□ -1.05
NPHP1-201ENST00000316534 GAKO14976 1311 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 NEDD4P46934 1319 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 ATP2B4P23634 1241 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 MCM5P33992 734 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 CERS3Q8IU89 383 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 MAGEB6Q8N7X4 407 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 RBM17Q96I25 401 aaKnown RBP8.49□□□□□ -1.05
NPHP1-201ENST00000316534 FDPSP14324 419 aaKnown RBP8.49□□□□□ -1.05
NPHP1-201ENST00000316534 PDCP20941 246 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 NTRK3Q16288 839 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 CAVIN4Q5BKX8 364 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 ATL3Q6DD88 541 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 CYB5R4Q7L1T6 521 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 CCDC83Q8IWF9 413 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 CNNM2Q9H8M5 875 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 LY9Q9HBG7 655 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 BRPF3Q9ULD4 1205 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 SUGT1Q9Y2Z0 365 aa8.49□□□□□ -1.05
NPHP1-201ENST00000316534 GYG1P46976 350 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 ST5P78524 1137 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 SEC23AQ15436 765 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 NLGN1Q8N2Q7 840 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 ANKS1AQ92625 1134 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 FAM217BQ9NTX9 383 aaPredicted RBP8.48□□□□□ -1.05
NPHP1-201ENST00000316534 TAOK2Q9UL54 1235 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms