RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 ATP2A1O14983 1001 aa23.42■■□□□ 1.34
SH3RF3-201ENST00000309415 HSF2BPO75031 334 aa23.42■■□□□ 1.34
SH3RF3-201ENST00000309415 HARSP12081 509 aaKnown RBP23.42■■□□□ 1.34
SH3RF3-201ENST00000309415 PTGS1P23219 599 aa23.42■■□□□ 1.34
SH3RF3-201ENST00000309415 PRIM1P49642 420 aaKnown RBP23.42■■□□□ 1.34
SH3RF3-201ENST00000309415 WDR66Q8TBY9 1149 aa23.42■■□□□ 1.34
SH3RF3-201ENST00000309415 PLIN2Q99541 437 aa23.42■■□□□ 1.34
SH3RF3-201ENST00000309415 EYA2O00167 538 aa23.42■■□□□ 1.34
SH3RF3-201ENST00000309415 TACC1O75410 805 aa23.42■■□□□ 1.34
SH3RF3-201ENST00000309415 CERS3Q8IU89 383 aa23.42■■□□□ 1.34
SH3RF3-201ENST00000309415 BICRAQ9NZM4 1560 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 F13A1P00488 732 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 RPL13P26373 211 aaKnown RBP23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 METTL22Q9BUU2 404 aaPredicted RBP23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 LETM2Q2VYF4 491 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 CCDC65Q8IXS2 484 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 POLR3AO14802 1390 aaPredicted RBP23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 KRT24Q2M2I5 525 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 FNBP1Q96RU3 617 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 RAB3IL1Q8TBN0 382 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 CCDC77Q9BR77 488 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 ZSWIM4Q9H7M6 989 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 FRMD4BQ9Y2L6 1034 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 PTPDC1A2A3K4 754 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 CHMP2AO43633 222 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 ZBED4O75132 1171 aa23.41■■□□□ 1.34
SH3RF3-201ENST00000309415 A0A1B0GUL7 405 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 TSPYL6Q8N831 410 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 SMTNP53814 917 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 AOPEPQ8N6M6 819 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 PRAG1Q86YV5 1406 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 VAMP4O75379 141 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 SLC8A3P57103 927 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 WDR44Q5JSH3 913 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 SV2BQ7L1I2 683 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 BRAPQ7Z569 592 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 ARMT1Q9H993 441 aa23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 EIF2AK4Q9P2K8 1649 aaKnown RBP23.4■■□□□ 1.34
SH3RF3-201ENST00000309415 BIRC3Q13489 604 aa23.39■■□□□ 1.34
SH3RF3-201ENST00000309415 USP48Q86UV5 1035 aa23.39■■□□□ 1.34
SH3RF3-201ENST00000309415 EAPPQ56P03 285 aaPredicted RBP23.39■■□□□ 1.34
SH3RF3-201ENST00000309415 CEP135Q66GS9 1140 aa23.39■■□□□ 1.34
SH3RF3-201ENST00000309415 C6orf163Q5TEZ5 329 aa23.39■■□□□ 1.33
SH3RF3-201ENST00000309415 ORAI2Q96SN7 254 aa23.39■■□□□ 1.33
SH3RF3-201ENST00000309415 A0A1W2PP64 1363 aa23.39■■□□□ 1.33
SH3RF3-201ENST00000309415 POLR3GO15318 223 aaPredicted RBP23.39■■□□□ 1.33
SH3RF3-201ENST00000309415 ALDH1B1P30837 517 aa23.39■■□□□ 1.33
SH3RF3-201ENST00000309415 MYCLP12524 364 aaPredicted RBP23.39■■□□□ 1.33
SH3RF3-201ENST00000309415 ARHGEF10O15013 1369 aa23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 CCT6AP40227 531 aaKnown RBP23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 IFT74Q96LB3 600 aa23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 KRT83P78385 493 aa23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 UBXN1Q04323 297 aa23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 PCDHB15Q9Y5E8 787 aa23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 CCDC169A6NNP5 214 aa23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 ZSCAN23Q3MJ62 389 aa23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 DCAF17Q5H9S7 520 aaPredicted RBP23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 IQUBQ8NA54 791 aa23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 DACT1Q9NYF0 836 aa23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 DKC1O60832 514 aaKnown RBP eCLIP23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 RUFY3Q7L099 469 aa23.38■■□□□ 1.33
SH3RF3-201ENST00000309415 DNM1Q05193 864 aaKnown RBP23.37■■□□□ 1.33
SH3RF3-201ENST00000309415 STRN3Q13033 797 aa23.37■■□□□ 1.33
SH3RF3-201ENST00000309415 KLHL40Q2TBA0 621 aa23.37■■□□□ 1.33
SH3RF3-201ENST00000309415 PHACTR3Q96KR7 559 aa23.37■■□□□ 1.33
SH3RF3-201ENST00000309415 GPR162Q16538 588 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 XAGE2Q96GT9 111 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 CCDC42Q96M95 316 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 MAK16Q9BXY0 300 aaKnown RBP23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 GLT8D2Q9H1C3 349 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 SLC52A2Q9HAB3 445 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 AK2P54819 239 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 CCDC63Q8NA47 563 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 PAIP2Q9BPZ3 127 aaKnown RBP23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 DCTPP1Q9H773 170 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 SBNO1A3KN83 1393 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 KRT5P13647 590 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 ZNF174Q15697 407 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 ATP6V0A2Q9Y487 856 aa23.36■■□□□ 1.33
SH3RF3-201ENST00000309415 EPB41P11171 864 aaKnown RBP23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 RFX1P22670 979 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 TRIM6Q9C030 488 aaPredicted RBP23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 CTAGE15A4D2H0 777 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 CTAGE8P0CG41 777 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 STX17P56962 302 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 TIMM10P62072 90 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 KIF5AQ12840 1032 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 CTAGE6Q86UF2 777 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 FMNL3Q8IVF7 1028 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 CTAGE4Q8IX94 777 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 AATFQ9NY61 560 aaKnown RBP eCLIP23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 H7C1D1 291 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 TNNI3KQ59H18 835 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 PODXL2Q9NZ53 605 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 GINS2Q9Y248 185 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 FPGT-TNNI3KV9GXZ4 949 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 B4E1Z4 1266 aa23.35■■□□□ 1.33
SH3RF3-201ENST00000309415 HAUS3Q68CZ6 603 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms