RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 GSPT1P15170 499 aaKnown RBP14.51□□□□□ -0.09
COL3A1-201ENST00000304636 OAS2P29728 719 aaKnown RBP14.51□□□□□ -0.09
COL3A1-201ENST00000304636 ADGRL2O95490 1459 aa14.51□□□□□ -0.09
COL3A1-201ENST00000304636 ZPR1O75312 459 aa14.51□□□□□ -0.09
COL3A1-201ENST00000304636 PPP4R3AQ6IN85 833 aa14.51□□□□□ -0.09
COL3A1-201ENST00000304636 SELENOSQ9BQE4 189 aa14.51□□□□□ -0.09
COL3A1-201ENST00000304636 CHL1O00533 1208 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 HEATR3Q7Z4Q2 680 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 CUTAO60888 179 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 NEBLO76041 1014 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 PPP1R2P41236 205 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 ZNF202O95125 648 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 STX8Q9UNK0 236 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 IKBKGQ9Y6K9 419 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 IL13P35225 146 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 CCDC152Q4G0S7 254 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 SCLT1Q96NL6 688 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 SAMD15Q9P1V8 674 aa14.5□□□□□ -0.09
COL3A1-201ENST00000304636 MKRN1Q9UHC7 482 aaKnown RBP14.5□□□□□ -0.09
COL3A1-201ENST00000304636 TSPY3P0CV98 308 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 TSPY8P0CW00 308 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 KRT13P13646 458 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 GPR161Q8N6U8 529 aaKnown RBP14.49□□□□□ -0.09
COL3A1-201ENST00000304636 HOMER2Q9NSB8 354 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 ABCC4O15439 1325 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 IBTKQ9P2D0 1353 aaPredicted RBP14.49□□□□□ -0.09
COL3A1-201ENST00000304636 DNAI2Q9GZS0 605 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 GOLGA6CA6NDK9 693 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 GOLGA6DP0CG33 693 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 CCT6AP40227 531 aaKnown RBP14.49□□□□□ -0.09
COL3A1-201ENST00000304636 TMTC1Q8IUR5 882 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 RSRC1Q96IZ7 334 aaKnown RBP14.49□□□□□ -0.09
COL3A1-201ENST00000304636 GOLGA6AQ9NYA3 693 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 TRAPPC8Q9Y2L5 1435 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 GSTO1P78417 241 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 TRMT2AQ8IZ69 625 aaKnown RBP14.49□□□□□ -0.09
COL3A1-201ENST00000304636 TSC1Q92574 1164 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 DTHD1Q6ZMT9 781 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 KRT28Q7Z3Y7 464 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 ZBTB9Q96C00 473 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 CEP63Q96MT8 703 aa14.49□□□□□ -0.09
COL3A1-201ENST00000304636 NDUFAB1O14561 156 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 ANTXR1Q9H6X2 564 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 C6orf50Q9HD87 102 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 CTNND2Q9UQB3 1225 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 ZNF608Q9ULD9 1512 aaPredicted RBP14.48□□□□□ -0.09
COL3A1-201ENST00000304636 INPP5BP32019 993 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 MCM7P33993 719 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 SLC39A6Q13433 755 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 EYA1Q99502 592 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 NAPAP54920 295 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 ARID5AQ03989 594 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 TMEM87BQ96K49 555 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 FAM227BQ96M60 508 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 CABP5Q9NP86 173 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 RBM28Q9NW13 759 aaKnown RBP14.48□□□□□ -0.09
COL3A1-201ENST00000304636 SBNO2Q9Y2G9 1366 aa14.48□□□□□ -0.09
COL3A1-201ENST00000304636 MTRF1LQ9UGC7 380 aaKnown RBP14.48□□□□□ -0.09
COL3A1-201ENST00000304636 PNMA6EA0A0J9YXQ4 647 aa14.47□□□□□ -0.09
COL3A1-201ENST00000304636 PAIP2Q9BPZ3 127 aaKnown RBP14.47□□□□□ -0.09
COL3A1-201ENST00000304636 SYNRGQ9UMZ2 1314 aa14.47□□□□□ -0.09
COL3A1-201ENST00000304636 HOXB7P09629 217 aa14.47□□□□□ -0.09
COL3A1-201ENST00000304636 RXRAP19793 462 aa14.47□□□□□ -0.09
COL3A1-201ENST00000304636 BRD3Q15059 726 aa14.47□□□□□ -0.09
COL3A1-201ENST00000304636 KRT79Q5XKE5 535 aa14.47□□□□□ -0.09
COL3A1-201ENST00000304636 TNNI3KQ59H18 835 aa14.47□□□□□ -0.09
COL3A1-201ENST00000304636 C8orf74Q6P047 294 aa14.47□□□□□ -0.09
COL3A1-201ENST00000304636 FPGT-TNNI3KV9GXZ4 949 aa14.47□□□□□ -0.09
COL3A1-201ENST00000304636 ABCC2Q92887 1545 aa14.47□□□□□ -0.09
COL3A1-201ENST00000304636 ACTN2P35609 894 aa14.46□□□□□ -0.09
COL3A1-201ENST00000304636 PKP1Q13835 747 aa14.46□□□□□ -0.09
COL3A1-201ENST00000304636 CCDC174Q6PII3 467 aa14.46□□□□□ -0.09
COL3A1-201ENST00000304636 XPO4Q9C0E2 1151 aaKnown RBP14.46□□□□□ -0.09
COL3A1-201ENST00000304636 KIAA0556O60303 1618 aa14.46□□□□□ -0.09
COL3A1-201ENST00000304636 MAGEB6P1A0A0J9YX57 407 aa14.46□□□□□ -0.09
COL3A1-201ENST00000304636 DEXIO95424 95 aa14.46□□□□□ -0.09
COL3A1-201ENST00000304636 MRFAP1L1Q96HT8 127 aa14.46□□□□□ -0.09
COL3A1-201ENST00000304636 VPS16Q9H269 839 aa14.46□□□□□ -0.09
COL3A1-201ENST00000304636 JAKMIP2Q96AA8 810 aa14.46□□□□□ -0.09
COL3A1-201ENST00000304636 NCOA5Q9HCD5 579 aaKnown RBP14.46□□□□□ -0.09
COL3A1-201ENST00000304636 VWA3AA6NCI4 1184 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 TBC1D8BQ0IIM8 1120 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 CCDC26Q8TAB7 109 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 NFE2L3Q9Y4A8 694 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 RGS12O14924 1447 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 A0A1B0GUA9 196 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 DMTNQ08495 405 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 ZSCAN26Q16670 478 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 ME3Q16798 604 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 USP37Q86T82 979 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 NUP58Q9BVL2 599 aa14.46□□□□□ -0.1
COL3A1-201ENST00000304636 GOLGA6BA6NDN3 693 aa14.45□□□□□ -0.1
COL3A1-201ENST00000304636 NOC4LQ9BVI4 516 aaKnown RBP14.45□□□□□ -0.1
COL3A1-201ENST00000304636 DDX21Q9NR30 783 aaKnown RBP eCLIP14.45□□□□□ -0.1
COL3A1-201ENST00000304636 ARHGAP25P42331 645 aa14.45□□□□□ -0.1
COL3A1-201ENST00000304636 LRRC8AQ8IWT6 810 aa14.45□□□□□ -0.1
COL3A1-201ENST00000304636 IFT20Q8IY31 132 aa14.45□□□□□ -0.1
COL3A1-201ENST00000304636 UBLCP1Q8WVY7 318 aaPredicted RBP14.45□□□□□ -0.1
COL3A1-201ENST00000304636 IQCGQ9H095 443 aaKnown RBP14.45□□□□□ -0.1
COL3A1-201ENST00000304636 KIAA0232Q92628 1395 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms