RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 STK11IPQ8N1F8 1099 aa28.65■■■□□ 2.18
SHISA5-201ENST00000296444 FSD2A1L4K1 749 aa28.64■■■□□ 2.18
SHISA5-201ENST00000296444 RBM17Q96I25 401 aaKnown RBP28.64■■■□□ 2.18
SHISA5-201ENST00000296444 HOXA10P31260 410 aaPredicted RBP28.64■■■□□ 2.17
SHISA5-201ENST00000296444 GNL3LQ9NVN8 582 aaKnown RBP28.64■■■□□ 2.17
SHISA5-201ENST00000296444 PPFIA3O75145 1194 aa28.63■■■□□ 2.17
SHISA5-201ENST00000296444 SRGNP10124 158 aa28.63■■■□□ 2.17
SHISA5-201ENST00000296444 TBC1D10CQ8IV04 446 aa28.63■■■□□ 2.17
SHISA5-201ENST00000296444 GOLGA6L3A6NEY3 463 aa28.62■■■□□ 2.17
SHISA5-201ENST00000296444 GSG1L2A8MUP6 293 aa28.62■■■□□ 2.17
SHISA5-201ENST00000296444 EVX2Q03828 476 aa28.62■■■□□ 2.17
SHISA5-201ENST00000296444 GLIPR1L2Q4G1C9 344 aa28.62■■■□□ 2.17
SHISA5-201ENST00000296444 UFL1O94874 794 aa28.62■■■□□ 2.17
SHISA5-201ENST00000296444 EXOSC10Q01780 885 aaKnown RBP28.62■■■□□ 2.17
SHISA5-201ENST00000296444 FOXD4L6Q3SYB3 417 aaPredicted RBP28.62■■■□□ 2.17
SHISA5-201ENST00000296444 FOXD4L3Q6VB84 417 aaPredicted RBP28.62■■■□□ 2.17
SHISA5-201ENST00000296444 SDR42E1Q8WUS8 393 aa28.62■■■□□ 2.17
SHISA5-201ENST00000296444 BRF1Q92994 677 aa28.62■■■□□ 2.17
SHISA5-201ENST00000296444 BRIP1Q9BX63 1249 aa28.61■■■□□ 2.17
SHISA5-201ENST00000296444 XDHP47989 1333 aa28.61■■■□□ 2.17
SHISA5-201ENST00000296444 INTS4Q96HW7 963 aaKnown RBP28.61■■■□□ 2.17
SHISA5-201ENST00000296444 CWC22Q9HCG8 908 aaKnown RBP28.6■■■□□ 2.17
SHISA5-201ENST00000296444 CTDSPL2Q05D32 466 aa28.6■■■□□ 2.17
SHISA5-201ENST00000296444 KRT32Q14532 448 aa28.6■■■□□ 2.17
SHISA5-201ENST00000296444 CACNA1SQ13698 1873 aa28.59■■■□□ 2.17
SHISA5-201ENST00000296444 MECOMQ03112 1051 aa28.59■■■□□ 2.17
SHISA5-201ENST00000296444 IFNL3Q8IZI9 196 aa28.59■■■□□ 2.17
SHISA5-201ENST00000296444 PARP3Q9Y6F1 533 aa28.59■■■□□ 2.17
SHISA5-201ENST00000296444 CLCN1P35523 988 aa28.59■■■□□ 2.17
SHISA5-201ENST00000296444 APOBRQ0VD83 1088 aa28.59■■■□□ 2.17
SHISA5-201ENST00000296444 DHX32Q7L7V1 743 aaKnown RBP28.59■■■□□ 2.17
SHISA5-201ENST00000296444 ANTXR2P58335 489 aa28.58■■■□□ 2.17
SHISA5-201ENST00000296444 IMMTQ16891 758 aaKnown RBP28.58■■■□□ 2.17
SHISA5-201ENST00000296444 TBC1D16Q8TBP0 767 aa28.58■■■□□ 2.17
SHISA5-201ENST00000296444 NSUN4Q96CB9 384 aaKnown RBP28.58■■■□□ 2.17
SHISA5-201ENST00000296444 ZNF213O14771 459 aa28.58■■■□□ 2.17
SHISA5-201ENST00000296444 SLC4A4Q9Y6R1 1079 aa28.58■■■□□ 2.17
SHISA5-201ENST00000296444 PATL2C9JE40 543 aaKnown RBP28.57■■■□□ 2.16
SHISA5-201ENST00000296444 CHRNA5P30532 468 aa28.57■■■□□ 2.16
SHISA5-201ENST00000296444 RAB11FIP4Q86YS3 637 aa28.57■■■□□ 2.16
SHISA5-201ENST00000296444 CRAMP1Q96RY5 1269 aa28.57■■■□□ 2.16
SHISA5-201ENST00000296444 RIOK1Q9BRS2 568 aaKnown RBP28.57■■■□□ 2.16
SHISA5-201ENST00000296444 LEMD3Q9Y2U8 911 aa28.57■■■□□ 2.16
SHISA5-201ENST00000296444 BBOX1O75936 387 aa28.57■■■□□ 2.16
SHISA5-201ENST00000296444 ZNF219Q9P2Y4 722 aaPredicted RBP28.57■■■□□ 2.16
SHISA5-201ENST00000296444 RIMBP2O15034 1052 aa28.56■■■□□ 2.16
SHISA5-201ENST00000296444 XRCC6P12956 609 aaKnown RBP eCLIP28.56■■■□□ 2.16
SHISA5-201ENST00000296444 MYH13Q9UKX3 1938 aa28.56■■■□□ 2.16
SHISA5-201ENST00000296444 CYP2D7A0A087X1C5 515 aa28.55■■■□□ 2.16
SHISA5-201ENST00000296444 FLAD1Q8NFF5 587 aa28.55■■■□□ 2.16
SHISA5-201ENST00000296444 SENP2Q9HC62 589 aa28.55■■■□□ 2.16
SHISA5-201ENST00000296444 PPEF1O14829 653 aaPredicted RBP28.55■■■□□ 2.16
SHISA5-201ENST00000296444 BAG4O95429 457 aaKnown RBP28.55■■■□□ 2.16
SHISA5-201ENST00000296444 GJB2P29033 226 aa28.55■■■□□ 2.16
SHISA5-201ENST00000296444 TDRD7Q8NHU6 1098 aaKnown RBP28.55■■■□□ 2.16
SHISA5-201ENST00000296444 CTNNA3Q9UI47 895 aa28.55■■■□□ 2.16
SHISA5-201ENST00000296444 C6orf229H3BNL8 230 aa28.54■■■□□ 2.16
SHISA5-201ENST00000296444 CYB5R4Q7L1T6 521 aa28.54■■■□□ 2.16
SHISA5-201ENST00000296444 ALDH8A1Q9H2A2 487 aaPredicted RBP28.54■■■□□ 2.16
SHISA5-201ENST00000296444 NCOA5Q9HCD5 579 aaKnown RBP28.54■■■□□ 2.16
SHISA5-201ENST00000296444 GGA1Q9UJY5 639 aa28.54■■■□□ 2.16
SHISA5-201ENST00000296444 NEDD4P46934 1319 aa28.54■■■□□ 2.16
SHISA5-201ENST00000296444 JAK2O60674 1132 aa28.54■■■□□ 2.16
SHISA5-201ENST00000296444 NAA16Q6N069 864 aaPredicted RBP28.54■■■□□ 2.16
SHISA5-201ENST00000296444 MB21D2Q8IYB1 491 aaPredicted RBP28.54■■■□□ 2.16
SHISA5-201ENST00000296444 ZNF622Q969S3 477 aaKnown RBP eCLIP28.54■■■□□ 2.16
SHISA5-201ENST00000296444 NRXN2Q9P2S2 1712 aa28.53■■■□□ 2.16
SHISA5-201ENST00000296444 ISY1Q9ULR0 285 aaKnown RBP28.53■■■□□ 2.16
SHISA5-201ENST00000296444 BRD1O95696 1058 aa28.53■■■□□ 2.16
SHISA5-201ENST00000296444 DIXDC1Q155Q3 683 aa28.53■■■□□ 2.16
SHISA5-201ENST00000296444 CD209Q9NNX6 404 aa28.53■■■□□ 2.16
SHISA5-201ENST00000296444 AATFQ9NY61 560 aaKnown RBP eCLIP28.53■■■□□ 2.16
SHISA5-201ENST00000296444 NUCB2P80303 420 aa28.52■■■□□ 2.16
SHISA5-201ENST00000296444 STK32BQ9NY57 414 aa28.52■■■□□ 2.16
SHISA5-201ENST00000296444 COL11A2P13942 1736 aaPredicted RBP28.52■■■□□ 2.16
SHISA5-201ENST00000296444 MAGEB6P1A0A0J9YX57 407 aa28.52■■■□□ 2.16
SHISA5-201ENST00000296444 SYT1P21579 422 aa28.52■■■□□ 2.16
SHISA5-201ENST00000296444 CCT2P78371 535 aaKnown RBP28.52■■■□□ 2.16
SHISA5-201ENST00000296444 SCRN1Q12765 414 aa28.52■■■□□ 2.16
SHISA5-201ENST00000296444 B4E1Z4 1266 aa28.51■■■□□ 2.15
SHISA5-201ENST00000296444 FGD1P98174 961 aa28.51■■■□□ 2.15
SHISA5-201ENST00000296444 ZSCAN31Q96LW9 406 aaPredicted RBP28.51■■■□□ 2.15
SHISA5-201ENST00000296444 NAPBQ9H115 298 aa28.51■■■□□ 2.15
SHISA5-201ENST00000296444 SMC3Q9UQE7 1217 aa28.51■■■□□ 2.15
SHISA5-201ENST00000296444 SLC4A8Q2Y0W8 1093 aa28.51■■■□□ 2.15
SHISA5-201ENST00000296444 SH2B1Q9NRF2 756 aaPredicted RBP28.5■■■□□ 2.15
SHISA5-201ENST00000296444 ATP6V0A2Q9Y487 856 aa28.5■■■□□ 2.15
SHISA5-201ENST00000296444 PRC1O43663 620 aa28.5■■■□□ 2.15
SHISA5-201ENST00000296444 AGXT2Q9BYV1 514 aa28.5■■■□□ 2.15
SHISA5-201ENST00000296444 NAP1L2Q9ULW6 460 aaPredicted RBP28.5■■■□□ 2.15
SHISA5-201ENST00000296444 SEMA3EO15041 775 aa28.49■■■□□ 2.15
SHISA5-201ENST00000296444 NPR1P16066 1061 aa28.49■■■□□ 2.15
SHISA5-201ENST00000296444 MRE11P49959 708 aa28.49■■■□□ 2.15
SHISA5-201ENST00000296444 MCTP1Q6DN14 999 aa28.49■■■□□ 2.15
SHISA5-201ENST00000296444 SP8Q8IXZ3 490 aa28.49■■■□□ 2.15
SHISA5-201ENST00000296444 MXD3Q9BW11 206 aa28.49■■■□□ 2.15
SHISA5-201ENST00000296444 PODXL2Q9NZ53 605 aa28.49■■■□□ 2.15
SHISA5-201ENST00000296444 CHD4Q14839 1912 aa28.49■■■□□ 2.15
SHISA5-201ENST00000296444 KCNQ5Q9NR82 932 aa28.48■■■□□ 2.15
SHISA5-201ENST00000296444 ATP2B4P23634 1241 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms