RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 RABGGTAQ92696 567 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 EXOC4Q96A65 974 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 RHOXF2Q9BQY4 288 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 TOMM22Q9NS69 142 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 MRFAP1Q9Y605 127 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 SETD1AO15047 1707 aaKnown RBP11.8□□□□□ -0.52
LMX1A-201ENST00000294816 CRYBG1Q9Y4K1 1723 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 IKBKBO14920 756 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 GTF2A1P52655 376 aaPredicted RBP11.8□□□□□ -0.52
LMX1A-201ENST00000294816 MROH7-TTC4A0A0A0MT08 1334 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 KIF28PB7ZC32 967 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 WDHD1O75717 1129 aaPredicted RBP11.79□□□□□ -0.52
LMX1A-201ENST00000294816 TXLNAP40222 546 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 CHMP4BP1P59074 171 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
LMX1A-201ENST00000294816 UBE3BQ7Z3V4 1068 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 TRMT44Q8IYL2 757 aaKnown RBP11.79□□□□□ -0.52
LMX1A-201ENST00000294816 CLIC6Q96NY7 704 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 PLEKHA4Q9H4M7 779 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 SETD1BQ9UPS6 1966 aaKnown RBP11.79□□□□□ -0.52
LMX1A-201ENST00000294816 N4BP1O75113 896 aaKnown RBP11.79□□□□□ -0.52
LMX1A-201ENST00000294816 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 SPECC1Q5M775 1068 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 CNNM3Q8NE01 707 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 SUGCTQ9HAC7 445 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 FAN1Q9Y2M0 1017 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 GOLGA6L9A6NEM1 432 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 DHX16O60231 1041 aaKnown RBP11.79□□□□□ -0.52
LMX1A-201ENST00000294816 CMA1P23946 247 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 EXOSC10Q01780 885 aaKnown RBP11.79□□□□□ -0.52
LMX1A-201ENST00000294816 MTF1Q14872 753 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 WASHC4Q2M389 1173 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 HSP90B2PQ58FF3 399 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 FOXR1Q6PIV2 292 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 KBTBD3Q8NAB2 608 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 AIFM3Q96NN9 605 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 POLR3EQ9NVU0 708 aa11.79□□□□□ -0.52
LMX1A-201ENST00000294816 ATP5J2-PTCD1G3V325 749 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
LMX1A-201ENST00000294816 KIF4BQ2VIQ3 1234 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
LMX1A-201ENST00000294816 HSP90AB3PQ58FF7 597 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 XAGE3Q8WTP9 111 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 UBXN6Q9BZV1 441 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 HSD3B7Q9H2F3 369 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
LMX1A-201ENST00000294816 AMOTL2Q9Y2J4 779 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 HSPD1P10809 573 aaKnown RBP11.78□□□□□ -0.52
LMX1A-201ENST00000294816 RXRAP19793 462 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 SLC39A6Q13433 755 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 RSRC2Q7L4I2 434 aaKnown RBP11.78□□□□□ -0.52
LMX1A-201ENST00000294816 ZNF274Q96GC6 653 aaPredicted RBP11.78□□□□□ -0.52
LMX1A-201ENST00000294816 HAUS7Q99871 368 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 EIF3JO75822 258 aaKnown RBP11.78□□□□□ -0.52
LMX1A-201ENST00000294816 TIMM10P62072 90 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 ZNF827Q17R98 1081 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 AXDND1Q5T1B0 1012 aaPredicted RBP11.78□□□□□ -0.52
LMX1A-201ENST00000294816 FCHSD1Q86WN1 690 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 EFCC1Q9HA90 598 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 PAG1Q9NWQ8 432 aa11.78□□□□□ -0.52
LMX1A-201ENST00000294816 NEDD4P46934 1319 aa11.77□□□□□ -0.52
LMX1A-201ENST00000294816 JCADQ9P266 1359 aa11.77□□□□□ -0.52
LMX1A-201ENST00000294816 CCDC151A5D8V7 595 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 COPS6Q7L5N1 327 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 HDXQ7Z353 690 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 CHMP4CQ96CF2 233 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 PCDHA5Q9Y5H7 936 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 SALL1Q9NSC2 1324 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.53
LMX1A-201ENST00000294816 PRC1O43663 620 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 ERLIN1O75477 346 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 TFRCP02786 760 aaKnown RBP11.77□□□□□ -0.53
LMX1A-201ENST00000294816 GCKRQ14397 625 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 AKAP4Q5JQC9 854 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 ZNF569Q5MCW4 686 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 BRAPQ7Z569 592 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 RALYLQ86SE5 291 aaKnown RBP11.77□□□□□ -0.53
LMX1A-201ENST00000294816 MRPL44Q9H9J2 332 aaKnown RBP11.77□□□□□ -0.53
LMX1A-201ENST00000294816 NFE2L3Q9Y4A8 694 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
LMX1A-201ENST00000294816 SOWAHDA6NJG2 315 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 FOXN1O15353 648 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 IVLP07476 585 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
LMX1A-201ENST00000294816 PDE4BQ07343 736 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 BRD3Q15059 726 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 TTC31Q49AM3 519 aaPredicted RBP11.76□□□□□ -0.53
LMX1A-201ENST00000294816 KIF5CO60282 957 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 CCDC175P0C221 793 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 ATP2B1P20020 1258 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 KIF23Q02241 960 aaPredicted RBP11.76□□□□□ -0.53
LMX1A-201ENST00000294816 PTPN12Q05209 780 aaKnown RBP11.76□□□□□ -0.53
LMX1A-201ENST00000294816 CCDC102BQ68D86 513 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 LMOD2Q6P5Q4 547 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 TMEM139Q8IV31 216 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 ABCB6Q9NP58 842 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 DDX21Q9NR30 783 aaKnown RBP eCLIP11.76□□□□□ -0.53
LMX1A-201ENST00000294816 INTS13Q9NVM9 706 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 FMN2Q9NZ56 1722 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms