RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 BCORQ6W2J9 1755 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 K7ELQ4 463 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 RBM5P52756 815 aaKnown RBP eCLIP11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 EVX2Q03828 476 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 TPRNQ4KMQ1 711 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 KIAA0825Q8IV33 1275 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 ZGPATQ8N5A5 531 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 ZNF384Q8TF68 577 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 NAPBQ9H115 298 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 PDRG1Q9NUG6 133 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 SPEF2Q9C093 1822 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 MAGEB6P1A0A0J9YX57 407 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 PPIP5K2O43314 1243 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 BLOC1S2Q6QNY1 142 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 NECAB1Q8N987 351 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 ZNF512BQ96KM6 892 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 GPHNQ9NQX3 736 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 CYP46A1Q9Y6A2 500 aa11.69□□□□□ -0.54
PPP4R1-201ENST00000285124 ZNF831Q5JPB2 1677 aa11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 ZNF213O14771 459 aa11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 PRDM1O75626 825 aa11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 RAD17O75943 681 aa11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 AK2P54819 239 aa11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 U3KPZ7 1027 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 MED23Q9ULK4 1368 aa11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 TCRBV5S4A2TA0A5A2 114 aa11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 STOX1Q6ZVD7 989 aa11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 TDRD7Q8NHU6 1098 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 SLC16A10Q8TF71 515 aa11.68□□□□□ -0.54
PPP4R1-201ENST00000285124 FOXP2O15409 715 aa11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 NSUN4Q96CB9 384 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 NEK1Q96PY6 1258 aa11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 COL1A1P02452 1464 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 CICQ96RK0 1608 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 IMMTQ16891 758 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 NLGN2Q8NFZ4 835 aa11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 TMX3Q96JJ7 454 aa11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 ZKSCAN3Q9BRR0 538 aa11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 SAP30BPQ9UHR5 308 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 PCDHAC2Q9Y5I4 1007 aa11.67□□□□□ -0.54
PPP4R1-201ENST00000285124 FOSBP53539 338 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 IFNL3Q8IZI9 196 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 LARGE2Q8N3Y3 721 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 WDR66Q8TBY9 1149 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 TNS1Q9HBL0 1735 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 E7EWF7 191 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 KCNA3P22001 575 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 PICALMQ13492 652 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 STYK1Q6J9G0 422 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 NKX2-3Q8TAU0 364 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 PIM2Q9P1W9 311 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 TTF2Q9UNY4 1162 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 SCAF8Q9UPN6 1271 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 LARGE1O95461 756 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 USP5P45974 858 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 CACNB3P54284 484 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 CCDC83Q8IWF9 413 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 TGFBRAP1Q8WUH2 860 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 EPB41L4AQ9HCS5 686 aaPredicted RBP11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 MTMR7Q9Y216 660 aa11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 ZBTB12Q9Y330 459 aaPredicted RBP11.66□□□□□ -0.54
PPP4R1-201ENST00000285124 GSG1L2A8MUP6 293 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 B4E1Z4 1266 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 Q6ZUG5 572 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 RUFY3Q7L099 469 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 MAPKAPK5Q8IW41 473 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 BRF1Q92994 677 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 DSCC1Q9BVC3 393 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 PATL2C9JE40 543 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 USP17L12C9JPN9 530 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 USP17L21D6R901 530 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 ECE2O60344 883 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 CYP2D6P10635 497 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 ANAPC15P60006 121 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 CCT2P78371 535 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 RALYLQ86SE5 291 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 EYA3Q99504 573 aa11.65□□□□□ -0.54
PPP4R1-201ENST00000285124 RXRAP19793 462 aa11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 PSMA5P28066 241 aa11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 CERS5Q8N5B7 392 aa11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 SH3RF3Q8TEJ3 882 aaPredicted RBP11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 NACAP1Q9BZK3 213 aa11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 MCM9Q9NXL9 1143 aa11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 CTNNA3Q9UI47 895 aa11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 USP17L8P0C7I0 530 aa11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 SLURP2P0DP57 97 aa11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 DALRD3Q5D0E6 543 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 CCDC144CPQ8IYA2 1237 aa11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 NOL10Q9BSC4 688 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-201ENST00000285124 APOBRQ0VD83 1088 aa11.63□□□□□ -0.55
PPP4R1-201ENST00000285124 TRDNQ13061 729 aa11.63□□□□□ -0.55
PPP4R1-201ENST00000285124 RBM26Q5T8P6 1007 aaKnown RBP11.63□□□□□ -0.55
PPP4R1-201ENST00000285124 SPTY2D1Q68D10 685 aaPredicted RBP11.63□□□□□ -0.55
PPP4R1-201ENST00000285124 TBC1D10CQ8IV04 446 aa11.63□□□□□ -0.55
PPP4R1-201ENST00000285124 SNX21Q969T3 373 aa11.63□□□□□ -0.55
PPP4R1-201ENST00000285124 CHAMP1Q96JM3 812 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms