RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CACNA1FO60840 1977 aa13.71□□□□□ -0.21
CCNA1-201ENST00000255465 CDC45O75419 566 aa13.71□□□□□ -0.21
CCNA1-201ENST00000255465 MMP10P09238 476 aa13.71□□□□□ -0.21
CCNA1-201ENST00000255465 PTGS1P23219 599 aa13.71□□□□□ -0.21
CCNA1-201ENST00000255465 DDR1Q08345 913 aa13.71□□□□□ -0.21
CCNA1-201ENST00000255465 ZSCAN25Q6NSZ9 544 aa13.71□□□□□ -0.21
CCNA1-201ENST00000255465 TSPYL6Q8N831 410 aa13.71□□□□□ -0.21
CCNA1-201ENST00000255465 ADAM21Q9UKJ8 722 aa13.71□□□□□ -0.21
CCNA1-201ENST00000255465 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.21
CCNA1-201ENST00000255465 POLR3GO15318 223 aaPredicted RBP13.7□□□□□ -0.22
CCNA1-201ENST00000255465 CAMTA2O94983 1202 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 ANXA1P04083 346 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 HCLS1P14317 486 aaPredicted RBP13.7□□□□□ -0.22
CCNA1-201ENST00000255465 GCFC2P16383 781 aaKnown RBP13.7□□□□□ -0.22
CCNA1-201ENST00000255465 SMC1AQ14683 1233 aaKnown RBP13.7□□□□□ -0.22
CCNA1-201ENST00000255465 PROSER3Q2NL68 480 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 LRP10Q7Z4F1 713 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 TMX4Q9H1E5 349 aaPredicted RBP13.7□□□□□ -0.22
CCNA1-201ENST00000255465 PRDM16Q9HAZ2 1276 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCNA1-201ENST00000255465 CLIP2Q9UDT6 1046 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 DDX19BQ9UMR2 479 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 ELF1P32519 619 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 MNAT1P51948 309 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 PDCD2Q16342 344 aaPredicted RBP13.7□□□□□ -0.22
CCNA1-201ENST00000255465 CCDC158Q5M9N0 1113 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 GBP6Q6ZN66 633 aa13.7□□□□□ -0.22
CCNA1-201ENST00000255465 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCNA1-201ENST00000255465 TM4SF1P30408 202 aa13.69□□□□□ -0.22
CCNA1-201ENST00000255465 INHBEP58166 350 aa13.69□□□□□ -0.22
CCNA1-201ENST00000255465 CCDC93Q567U6 631 aa13.69□□□□□ -0.22
CCNA1-201ENST00000255465 FHDC1Q9C0D6 1143 aaPredicted RBP13.69□□□□□ -0.22
CCNA1-201ENST00000255465 SUDS3Q9H7L9 328 aaPredicted RBP13.69□□□□□ -0.22
CCNA1-201ENST00000255465 VEZTQ9HBM0 779 aa13.69□□□□□ -0.22
CCNA1-201ENST00000255465 CHPF2Q9P2E5 772 aa13.69□□□□□ -0.22
CCNA1-201ENST00000255465 KIF13BQ9NQT8 1826 aa13.69□□□□□ -0.22
CCNA1-201ENST00000255465 LMAN1P49257 510 aa13.68□□□□□ -0.22
CCNA1-201ENST00000255465 GRIK3Q13003 919 aa13.68□□□□□ -0.22
CCNA1-201ENST00000255465 TWISTNBQ3B726 338 aaPredicted RBP13.68□□□□□ -0.22
CCNA1-201ENST00000255465 WWC2Q6AWC2 1192 aa13.68□□□□□ -0.22
CCNA1-201ENST00000255465 TBC1D9Q6ZT07 1266 aa13.68□□□□□ -0.22
CCNA1-201ENST00000255465 TTLL7Q6ZT98 887 aa13.68□□□□□ -0.22
CCNA1-201ENST00000255465 ZNF513Q8N8E2 541 aaPredicted RBP13.68□□□□□ -0.22
CCNA1-201ENST00000255465 DBF4Q9UBU7 674 aaPredicted RBP13.68□□□□□ -0.22
CCNA1-201ENST00000255465 ANAPC4Q9UJX5 808 aa13.68□□□□□ -0.22
CCNA1-201ENST00000255465 SETSIPP0DME0 302 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 CCDC192P0DO97 292 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 KCNJ6P48051 423 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 MRPL12P52815 198 aaKnown RBP13.67□□□□□ -0.22
CCNA1-201ENST00000255465 UBE2HP62256 183 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 EXOSC9Q06265 439 aaKnown RBP13.67□□□□□ -0.22
CCNA1-201ENST00000255465 PKP1Q13835 747 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 NFIXQ14938 502 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 KLHL23Q8NBE8 558 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 NRXN2Q9P2S2 1712 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 CAVIN2O95810 425 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 CCDC96Q2M329 555 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 TBC1D9BQ66K14 1250 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 CLEC4GQ6UXB4 293 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 CHD1LQ86WJ1 897 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 POTEDQ86YR6 584 aa13.67□□□□□ -0.22
CCNA1-201ENST00000255465 TRIM6Q9C030 488 aaPredicted RBP13.67□□□□□ -0.22
CCNA1-201ENST00000255465 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
CCNA1-201ENST00000255465 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 POLRMTO00411 1230 aaKnown RBP13.66□□□□□ -0.22
CCNA1-201ENST00000255465 RGL2O15211 777 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 PPFIA4O75335 1185 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 RLBP1P12271 317 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
CCNA1-201ENST00000255465 CUL4AQ13619 759 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 HLFQ16534 295 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 ZKSCAN2Q63HK3 967 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 BICDL1Q6ZP65 573 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 PLA2G4DQ86XP0 818 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 SYT17Q9BSW7 474 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 MCM8Q9UJA3 840 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 ZNF652Q9Y2D9 606 aa13.66□□□□□ -0.22
CCNA1-201ENST00000255465 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
CCNA1-201ENST00000255465 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 IPO8O15397 1037 aaKnown RBP13.65□□□□□ -0.22
CCNA1-201ENST00000255465 AIMP1Q12904 312 aaKnown RBP13.65□□□□□ -0.22
CCNA1-201ENST00000255465 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
CCNA1-201ENST00000255465 MICALL1Q8N3F8 863 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 XAGE3Q8WTP9 111 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 GCC1Q96CN9 775 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 SPATS2LQ9NUQ6 558 aaKnown RBP13.65□□□□□ -0.22
CCNA1-201ENST00000255465 HYPKQ9NX55 129 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 RPS6KL1Q9Y6S9 549 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 VAMP4O75379 141 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 ERLIN2O94905 339 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 HNRNPH1P31943 449 aaKnown RBP13.65□□□□□ -0.22
CCNA1-201ENST00000255465 RBBP5Q15291 538 aaKnown RBP13.65□□□□□ -0.22
CCNA1-201ENST00000255465 ARHGAP29Q52LW3 1261 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 ARMC2Q8NEN0 867 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 CCDC26Q8TAB7 109 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms