RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 OTUD7BQ6GQQ9 843 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 C17orf53Q8N3J3 647 aaPredicted RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 IL17REQ8NFR9 667 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 AATFQ9NY61 560 aaKnown RBP eCLIP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 KCNQ2O43526 872 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 IVNS1ABPQ9Y6Y0 642 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 KIF20AO95235 890 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 SSR1P43307 286 aaKnown RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 SPA17Q15506 151 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 TPTE2Q6XPS3 522 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 EXOC1Q9NV70 894 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 TMCO5BA8MYB1 307 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 KIF5CO60282 957 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 KCNG4Q8TDN1 519 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 DHX58Q96C10 678 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 CCDC113Q9H0I3 377 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 ZNF277Q9NRM2 450 aaPredicted RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 HOMER2Q9NSB8 354 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 BMP2KQ9NSY1 1161 aaPredicted RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 UBASH3AP57075 661 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 ANAPC15P60006 121 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 DALRD3Q5D0E6 543 aaKnown RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 SNX21Q969T3 373 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 CALML4Q96GE6 196 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 PHKG2P15735 406 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 RPS6KB1P23443 525 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 SNW1Q13573 536 aaKnown RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 STX1AQ16623 288 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 NAA16Q6N069 864 aaPredicted RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 LRRC24Q50LG9 513 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 CCDC148Q8NFR7 591 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 SYKP43405 635 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 RAB3GAP1Q15042 981 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 ZNF174Q15697 407 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 CPXCR1Q8N123 301 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 ERCC4Q92889 916 aaPredicted RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 GPHNQ9NQX3 736 aaPredicted RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 HMG20BQ9P0W2 317 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 SPTLC2O15270 562 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 GSTO1P78417 241 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 PROSER3Q2NL68 480 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 DNAJC10Q8IXB1 793 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 CCDC12Q8WUD4 166 aaPredicted RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 TCP11L1Q9NUJ3 509 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 TLR7Q9NYK1 1049 aaKnown RBP5.38□□□□□ -1.55
RAP1B-201ENST00000250559 ALDH1L1O75891 902 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 HLA-DOAP06340 250 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 MMP10P09238 476 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 TMEM266Q2M3C6 531 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 PODNQ7Z5L7 613 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 CUL5Q93034 780 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 PHKBQ93100 1093 aa5.38□□□□□ -1.55
RAP1B-201ENST00000250559 PRDM15P57071 1507 aaPredicted RBP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 AGRPO00253 132 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 CALM1P0DP23 149 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 CALM2P0DP24 149 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 CALM3P0DP25 149 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 MRPS27Q92552 414 aaKnown RBP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 ZNF157P51786 506 aaPredicted RBP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 KIF4BQ2VIQ3 1234 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 UNC5CLQ8IV45 518 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 SMARCC1Q92922 1105 aaPredicted RBP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 MAP7D2Q96T17 732 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 DDX21Q9NR30 783 aaKnown RBP eCLIP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 HELLSQ9NRZ9 838 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 AKNAD1Q5T1N1 836 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 hCG_1642624A0A1W2PR95 340 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 DDX39AO00148 427 aaKnown RBP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 NOLC1Q14978 699 aaKnown RBP eCLIP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 KARSQ15046 597 aaKnown RBP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 PTH1RQ03431 593 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 ARID5AQ03989 594 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 PRPF4BQ13523 1007 aaKnown RBP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 PKP1Q13835 747 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 SDR42E1Q8WUS8 393 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 KRT23Q9C075 422 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 NYXQ9GZU5 481 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 VWA3AA6NCI4 1184 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 RAD51AP2Q09MP3 1159 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 CEP135Q66GS9 1140 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 ZFP91Q96JP5 570 aaPredicted RBP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 TBX22Q9Y458 520 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 TRPM1Q7Z4N2 1603 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 CCDC102BQ68D86 513 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.37□□□□□ -1.55
RAP1B-201ENST00000250559 KRT2P35908 639 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 PICK1Q9NRD5 415 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 MLH3Q9UHC1 1453 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 ZNF532Q9HCE3 1301 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 EYA2O00167 538 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 SYT1P21579 422 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 NAPAP54920 295 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 RGS22Q8NE09 1264 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 BAG3O95817 575 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 TAF12Q16514 161 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 RTN1Q16799 776 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 PLCD4Q9BRC7 762 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 RBSNQ9H1K0 784 aa5.37□□□□□ -1.55
RAP1B-201ENST00000250559 LUC7LQ9NQ29 371 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms