RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 SPATA31A6Q5VVP1 1343 aa17.34■□□□□ 0.37
MBD4-201ENST00000249910 KLF18A0A0U1RQI7 1052 aa17.33■□□□□ 0.37
MBD4-201ENST00000249910 B4E1Z4 1266 aa17.33■□□□□ 0.37
MBD4-201ENST00000249910 NPHP1O15259 732 aa17.33■□□□□ 0.37
MBD4-201ENST00000249910 ADGRA1Q86SQ6 560 aa17.33■□□□□ 0.37
MBD4-201ENST00000249910 ZNF274Q96GC6 653 aaPredicted RBP17.33■□□□□ 0.37
MBD4-201ENST00000249910 SENP2Q9HC62 589 aa17.33■□□□□ 0.37
MBD4-201ENST00000249910 BSDC1Q9NW68 430 aaPredicted RBP17.33■□□□□ 0.37
MBD4-201ENST00000249910 LAMA4Q16363 1823 aa17.33■□□□□ 0.37
MBD4-201ENST00000249910 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.37
MBD4-201ENST00000249910 RTL9Q8NET4 1388 aa17.33■□□□□ 0.36
MBD4-201ENST00000249910 RRP9O43818 475 aaKnown RBP17.33■□□□□ 0.36
MBD4-201ENST00000249910 CTDSPL2Q05D32 466 aa17.33■□□□□ 0.36
MBD4-201ENST00000249910 OTUD7BQ6GQQ9 843 aa17.33■□□□□ 0.36
MBD4-201ENST00000249910 CYB5R4Q7L1T6 521 aa17.33■□□□□ 0.36
MBD4-201ENST00000249910 LCORLQ8N3X6 602 aa17.33■□□□□ 0.36
MBD4-201ENST00000249910 SYAP1Q96A49 352 aaPredicted RBP17.33■□□□□ 0.36
MBD4-201ENST00000249910 FTOQ9C0B1 505 aaKnown RBP eCLIP17.33■□□□□ 0.36
MBD4-201ENST00000249910 TRDNQ13061 729 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 VPS37DQ86XT2 251 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 SEPT12Q8IYM1 358 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 IFNL3Q8IZI9 196 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 GJB4Q9NTQ9 266 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 LRP5O75197 1615 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 FDPSP14324 419 aaKnown RBP17.32■□□□□ 0.36
MBD4-201ENST00000249910 RC3H1Q5TC82 1133 aaKnown RBP17.32■□□□□ 0.36
MBD4-201ENST00000249910 GIMAP6Q6P9H5 292 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 FAM196AQ6ZSG2 479 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 HPS5Q9UPZ3 1129 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 NEDD4P46934 1319 aa17.32■□□□□ 0.36
MBD4-201ENST00000249910 GOLGA8BA8MQT2 603 aa17.31■□□□□ 0.36
MBD4-201ENST00000249910 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
MBD4-201ENST00000249910 SPATA32Q96LK8 384 aa17.31■□□□□ 0.36
MBD4-201ENST00000249910 LLPHQ9BRT6 129 aaKnown RBP17.31■□□□□ 0.36
MBD4-201ENST00000249910 NAPBQ9H115 298 aa17.31■□□□□ 0.36
MBD4-201ENST00000249910 RRAGDQ9NQL2 400 aaPredicted RBP17.31■□□□□ 0.36
MBD4-201ENST00000249910 JAG2Q9Y219 1238 aa17.31■□□□□ 0.36
MBD4-201ENST00000249910 TACC3Q9Y6A5 838 aa17.31■□□□□ 0.36
MBD4-201ENST00000249910 GSG1L2A8MUP6 293 aa17.31■□□□□ 0.36
MBD4-201ENST00000249910 PATL2C9JE40 543 aaKnown RBP17.31■□□□□ 0.36
MBD4-201ENST00000249910 SMIM22K7EJ46 135 aa17.31■□□□□ 0.36
MBD4-201ENST00000249910 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
MBD4-201ENST00000249910 FAM84BQ96KN1 310 aaPredicted RBP17.31■□□□□ 0.36
MBD4-201ENST00000249910 RREB1Q92766 1687 aa17.31■□□□□ 0.36
MBD4-201ENST00000249910 COL5A3P25940 1745 aaPredicted RBP17.31■□□□□ 0.36
MBD4-201ENST00000249910 KDM4AO75164 1064 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 RFC4P35249 363 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 RESTQ13127 1097 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 HSP90AA2PQ14568 343 aaPredicted RBP17.3■□□□□ 0.36
MBD4-201ENST00000249910 CCDC144CPQ8IYA2 1237 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 SDR42E1Q8WUS8 393 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 TFCP2L1Q9NZI6 479 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 SLC10A5Q5PT55 438 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 CCDC183Q5T5S1 534 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 LEO1Q8WVC0 666 aaPredicted RBP17.3■□□□□ 0.36
MBD4-201ENST00000249910 SLC4A4Q9Y6R1 1079 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 SALL1Q9NSC2 1324 aa17.3■□□□□ 0.36
MBD4-201ENST00000249910 LIG1P18858 919 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 CYP7A1P22680 504 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 EVCP57679 992 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 CAMK4Q16566 473 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
MBD4-201ENST00000249910 ATRNO75882 1429 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 ADD1P35611 737 aaKnown RBP17.29■□□□□ 0.36
MBD4-201ENST00000249910 HMGN5P82970 282 aaKnown RBP17.29■□□□□ 0.36
MBD4-201ENST00000249910 CSPP1Q1MSJ5 1256 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 RRP12Q5JTH9 1297 aaKnown RBP17.29■□□□□ 0.36
MBD4-201ENST00000249910 TRAPPC3LQ5T215 181 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 MYL10Q9BUA6 226 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 TSPY26PQ9H489 355 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 TOMM22Q9NS69 142 aa17.29■□□□□ 0.36
MBD4-201ENST00000249910 TDO2P48775 406 aa17.28■□□□□ 0.36
MBD4-201ENST00000249910 UBE4AQ14139 1066 aa17.28■□□□□ 0.36
MBD4-201ENST00000249910 CAVIN4Q5BKX8 364 aa17.28■□□□□ 0.36
MBD4-201ENST00000249910 TXNRD3Q86VQ6 643 aa17.28■□□□□ 0.36
MBD4-201ENST00000249910 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
MBD4-201ENST00000249910 NYXQ9GZU5 481 aa17.28■□□□□ 0.36
MBD4-201ENST00000249910 ZSWIM5Q9P217 1185 aa17.28■□□□□ 0.36
MBD4-201ENST00000249910 MYH7P12883 1935 aa17.28■□□□□ 0.36
MBD4-201ENST00000249910 ZKSCAN3Q9BRR0 538 aa17.28■□□□□ 0.36
MBD4-201ENST00000249910 SCAND2PQ9GZW5 306 aaPredicted RBP17.28■□□□□ 0.36
MBD4-201ENST00000249910 ANGEL1Q9UNK9 670 aaKnown RBP17.28■□□□□ 0.36
MBD4-201ENST00000249910 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
MBD4-201ENST00000249910 ZNF804BA4D1E1 1349 aa17.28■□□□□ 0.36
MBD4-201ENST00000249910 GOLGA6L4A6NEF3 574 aa17.27■□□□□ 0.36
MBD4-201ENST00000249910 CPLX1O14810 134 aa17.27■□□□□ 0.36
MBD4-201ENST00000249910 MICU3Q86XE3 530 aa17.27■□□□□ 0.36
MBD4-201ENST00000249910 CERKQ8TCT0 537 aa17.27■□□□□ 0.36
MBD4-201ENST00000249910 PGBD1Q96JS3 809 aa17.27■□□□□ 0.36
MBD4-201ENST00000249910 BTAF1O14981 1849 aa17.27■□□□□ 0.35
MBD4-201ENST00000249910 TM4SF1P30408 202 aa17.27■□□□□ 0.35
MBD4-201ENST00000249910 ZNF384Q8TF68 577 aa17.27■□□□□ 0.35
MBD4-201ENST00000249910 COL1A1P02452 1464 aaPredicted RBP17.26■□□□□ 0.35
MBD4-201ENST00000249910 NFIXQ14938 502 aa17.26■□□□□ 0.35
MBD4-201ENST00000249910 AIFM3Q96NN9 605 aa17.26■□□□□ 0.35
MBD4-201ENST00000249910 GNL3LQ9NVN8 582 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms