RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 RTL1A6NKG5 1358 aa21.42■■□□□ 1.02
SMPD3-201ENST00000219334 RXRAP19793 462 aa21.42■■□□□ 1.02
SMPD3-201ENST00000219334 FCHSD1Q86WN1 690 aa21.42■■□□□ 1.02
SMPD3-201ENST00000219334 CCDC155Q8N6L0 562 aa21.42■■□□□ 1.02
SMPD3-201ENST00000219334 IQUBQ8NA54 791 aa21.42■■□□□ 1.02
SMPD3-201ENST00000219334 ARID5AQ03989 594 aa21.42■■□□□ 1.02
SMPD3-201ENST00000219334 RASAL2Q9UJF2 1139 aa21.42■■□□□ 1.02
SMPD3-201ENST00000219334 ARL1P40616 181 aaPredicted RBP21.42■■□□□ 1.02
SMPD3-201ENST00000219334 ANO6Q4KMQ2 910 aa21.41■■□□□ 1.02
SMPD3-201ENST00000219334 CTR9Q6PD62 1173 aa21.41■■□□□ 1.02
SMPD3-201ENST00000219334 NIM1KQ8IY84 436 aa21.41■■□□□ 1.02
SMPD3-201ENST00000219334 SLC52A2Q9HAB3 445 aa21.41■■□□□ 1.02
SMPD3-201ENST00000219334 LETM2Q2VYF4 491 aa21.41■■□□□ 1.02
SMPD3-201ENST00000219334 IQCGQ9H095 443 aaKnown RBP21.41■■□□□ 1.02
SMPD3-201ENST00000219334 TACC1O75410 805 aa21.41■■□□□ 1.02
SMPD3-201ENST00000219334 CEP112Q8N8E3 955 aa21.41■■□□□ 1.02
SMPD3-201ENST00000219334 GLT8D2Q9H1C3 349 aa21.41■■□□□ 1.02
SMPD3-201ENST00000219334 ALDH1B1P30837 517 aa21.4■■□□□ 1.02
SMPD3-201ENST00000219334 NEK11Q8NG66 645 aa21.4■■□□□ 1.02
SMPD3-201ENST00000219334 PLCB3Q01970 1234 aa21.4■■□□□ 1.02
SMPD3-201ENST00000219334 CCDC65Q8IXS2 484 aa21.4■■□□□ 1.02
SMPD3-201ENST00000219334 DNM1Q05193 864 aaKnown RBP21.4■■□□□ 1.02
SMPD3-201ENST00000219334 MICALCLQ6ZW33 695 aa21.4■■□□□ 1.02
SMPD3-201ENST00000219334 USP48Q86UV5 1035 aa21.4■■□□□ 1.02
SMPD3-201ENST00000219334 CGNQ9P2M7 1197 aaKnown RBP21.4■■□□□ 1.02
SMPD3-201ENST00000219334 ERICH4A6NGS2 130 aa21.4■■□□□ 1.02
SMPD3-201ENST00000219334 ATP2A1O14983 1001 aa21.4■■□□□ 1.02
SMPD3-201ENST00000219334 A1BGP04217 495 aa21.4■■□□□ 1.02
SMPD3-201ENST00000219334 PTGS1P23219 599 aa21.4■■□□□ 1.02
SMPD3-201ENST00000219334 AK2P54819 239 aa21.39■■□□□ 1.02
SMPD3-201ENST00000219334 PPM1EQ8WY54 764 aa21.39■■□□□ 1.02
SMPD3-201ENST00000219334 XAGE2Q96GT9 111 aa21.39■■□□□ 1.02
SMPD3-201ENST00000219334 A0A1W2PRG0 241 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 DKC1O60832 514 aaKnown RBP eCLIP21.39■■□□□ 1.01
SMPD3-201ENST00000219334 RUFY3Q7L099 469 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 FAM200AQ8TCP9 573 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 CCDC77Q9BR77 488 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 ZSWIM4Q9H7M6 989 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 ARMT1Q9H993 441 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 UGGT2Q9NYU1 1516 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 NOP56O00567 594 aaKnown RBP21.39■■□□□ 1.01
SMPD3-201ENST00000219334 SMTNP53814 917 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 ZYXQ15942 572 aaKnown RBP21.39■■□□□ 1.01
SMPD3-201ENST00000219334 TNNI3KQ59H18 835 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 AOPEPQ8N6M6 819 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 FNBP1Q96RU3 617 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 FPGT-TNNI3KV9GXZ4 949 aa21.39■■□□□ 1.01
SMPD3-201ENST00000219334 SV2BQ7L1I2 683 aa21.38■■□□□ 1.01
SMPD3-201ENST00000219334 TMEM87BQ96K49 555 aa21.38■■□□□ 1.01
SMPD3-201ENST00000219334 GSTA5Q7RTV2 222 aa21.38■■□□□ 1.01
SMPD3-201ENST00000219334 DNAJC10Q8IXB1 793 aa21.38■■□□□ 1.01
SMPD3-201ENST00000219334 CCDC42Q96M95 316 aa21.38■■□□□ 1.01
SMPD3-201ENST00000219334 KRT83P78385 493 aa21.38■■□□□ 1.01
SMPD3-201ENST00000219334 SPECC1LQ69YQ0 1117 aa21.38■■□□□ 1.01
SMPD3-201ENST00000219334 WDR70Q9NW82 654 aa21.38■■□□□ 1.01
SMPD3-201ENST00000219334 PLIN2Q99541 437 aa21.38■■□□□ 1.01
SMPD3-201ENST00000219334 ZBED4O75132 1171 aa21.37■■□□□ 1.01
SMPD3-201ENST00000219334 TCIRG1Q13488 830 aa21.37■■□□□ 1.01
SMPD3-201ENST00000219334 PRKG1Q13976 671 aa21.37■■□□□ 1.01
SMPD3-201ENST00000219334 ZSCAN23Q3MJ62 389 aa21.37■■□□□ 1.01
SMPD3-201ENST00000219334 LPIN2Q92539 896 aa21.37■■□□□ 1.01
SMPD3-201ENST00000219334 FRMD4BQ9Y2L6 1034 aa21.37■■□□□ 1.01
SMPD3-201ENST00000219334 B4E1Z4 1266 aa21.37■■□□□ 1.01
SMPD3-201ENST00000219334 BIRC3Q13489 604 aa21.37■■□□□ 1.01
SMPD3-201ENST00000219334 FMNL3Q8IVF7 1028 aa21.37■■□□□ 1.01
SMPD3-201ENST00000219334 CCDC50Q8IVM0 306 aa21.37■■□□□ 1.01
SMPD3-201ENST00000219334 HARSP12081 509 aaKnown RBP21.37■■□□□ 1.01
SMPD3-201ENST00000219334 TMEM110-MUSTN1A8MSY1 372 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 CHMLP26374 656 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 KIF5AQ12840 1032 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 CCT6AP40227 531 aaKnown RBP21.36■■□□□ 1.01
SMPD3-201ENST00000219334 SLC8A3P57103 927 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 DLGAP5Q15398 846 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 RNF187Q5TA31 235 aaPredicted RBP21.36■■□□□ 1.01
SMPD3-201ENST00000219334 CARD14Q9BXL6 1004 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 PLCD1P51178 756 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 APPBP2Q92624 585 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 WDR44Q5JSH3 913 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 TBC1D22AQ8WUA7 517 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 IFT74Q96LB3 600 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 PARD3Q8TEW0 1356 aa21.36■■□□□ 1.01
SMPD3-201ENST00000219334 H7C1D1 291 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 HAUS3Q68CZ6 603 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.35■■□□□ 1.01
SMPD3-201ENST00000219334 EIF2AK4Q9P2K8 1649 aaKnown RBP21.35■■□□□ 1.01
SMPD3-201ENST00000219334 SLC1A4P43007 532 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 CEP135Q66GS9 1140 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 CHMP2AO43633 222 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 STX17P56962 302 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 UBXN1Q04323 297 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 FLAD1Q8NFF5 587 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 DNAJC25Q9H1X3 360 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 HSF2BPO75031 334 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 TAF5LO75529 589 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 DEXIO95424 95 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 DBNDD2Q9BQY9 259 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 AATFQ9NY61 560 aaKnown RBP eCLIP21.35■■□□□ 1.01
SMPD3-201ENST00000219334 ATP10AO60312 1499 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 CCDC169A6NNP5 214 aa21.35■■□□□ 1.01
SMPD3-201ENST00000219334 ZNF174Q15697 407 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms