RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Lmod1Q8BVA4 595 aa16.84■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Letm1Q9Z2I0 738 aa16.84■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Nrxn2E9Q7X7 1710 aa16.84■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Myh2G3UW82 1942 aa16.83■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Mtcl1Q3UHU5 1945 aa16.83■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Casp12O08736 419 aa16.83■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Eef2kO08796 724 aa16.83■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Mapkapk5O54992 473 aa16.83■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Gja5Q01231 358 aa16.83■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Spty2d1Q68FG3 682 aa16.83■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Ppp1r10Q80W00 888 aaKnown RBP16.83■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Tceanc2Q8R2M0 207 aa16.83■□□□□ 0.28
Ssr1-204ENSMUST00000225319 SrrtQ99MR6 875 aaKnown RBP16.83■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Aox3G3X982 1335 aa16.83■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Pnpla6Q3TRM4 1355 aa16.83■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Cyp2d34L7N463 504 aa16.82■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Tango6Q8C3S2 1079 aa16.82■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Pcdhb22Q91XZ8 794 aa16.82■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Rcan3Q9JKK0 239 aa16.82■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Cyp3a59D3Z2W7 503 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Ube2hP62257 183 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Esyt2Q3TZZ7 845 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Ell2Q3UKU1 639 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Bms1Q6PGF5 1284 aaKnown RBP16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Ces1dQ8VCT4 565 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Med4Q9CQA5 270 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Erich6bQ9D4S6 220 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Rbm6S4R1W5 1118 aaKnown RBP16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Col20a1Q923P0 1320 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 CrcpO35427 148 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Hand2Q61039 217 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Glg1Q61543 1175 aaKnown RBP16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Rbm43Q99J64 343 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 BrapQ99MP8 591 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Trmt44Q9D2Q2 713 aa16.81■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Frmpd3A0A140LIW3 1774 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Aox1O54754 1333 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Ccdc173A0JLY1 547 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Gm29094F6Q785 221 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Dhx16G3X8X0 1044 aaKnown RBP16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 NapbP28663 298 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Fam83bQ0VBM2 1012 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Tbc1d30Q69ZT9 766 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Fchsd1Q6PFY1 688 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Casc1Q6TDU8 730 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Cnot6lQ8VEG6 555 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Tbc1d7Q9D0K0 293 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Cyp2ab1S4R196 498 aa16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 AfdnQ9QZQ1 1820 aaKnown RBP16.8■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Fam184aE9PW83 1143 aa16.79■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Znf326O88291 580 aa16.79■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Slc4a4O88343 1079 aa16.79■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Cfap69Q8BH53 942 aa16.79■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Tmem179Q8BHH9 233 aa16.79■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Kcnq3Q8K3F6 873 aa16.79■□□□□ 0.28
Ssr1-204ENSMUST00000225319 NaspQ99MD9 773 aaKnown RBP16.79■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Dock5B2RY04 1868 aa16.79■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Med23Q80YQ2 1367 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Btaf1E9QAE3 1848 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Adgra3Q7TT36 1310 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Stat1P42225 749 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 FanccP50652 591 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Gas1Q01721 343 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Ezh2Q61188 746 aaKnown RBP16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Ccdc178Q8CDV0 866 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Gpr108Q91WD0 569 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Pold4Q9CWP8 107 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Gdf11Q9Z1W4 405 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Scn9aQ62205 1984 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Csrnp1P59054 583 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Acap3Q6NXL5 833 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 RarsQ9D0I9 660 aaKnown RBP16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Igbp1bQ9QZ29 343 aa16.78■□□□□ 0.28
Ssr1-204ENSMUST00000225319 Psme4Q5SSW2 1843 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Zscan25B2RX31 543 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Ctdnep1Q3TP92 244 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Atp2b4Q6Q477 1205 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Nol12Q8BG17 217 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Chrna2Q91X60 512 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Eaf2Q91ZD6 262 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Krt84Q99M73 603 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 NsmfQ99NF2 532 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 1700018B08RikQ9DA83 213 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Zbtb43Q9DAI4 467 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Ush1cQ9ES64 910 aa16.77■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Dennd3A2RT67 1274 aa16.76■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Ercc3P49135 783 aa16.76■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Dok7Q18PE0 504 aa16.76■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Slc44a1Q6X893 653 aa16.76■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Q8C6G1 249 aa16.76■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Stag1Q9D3E6 1258 aa16.76■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Odf2lQ9D478 642 aa16.76■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Myh6Q02566 1938 aaKnown RBP16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 NesQ6P5H2 1864 aaKnown RBP16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Zswim8Q3UHH1 1832 aaKnown RBP16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Gm3893E9Q1I1 302 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Cd3dP04235 173 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Cnnm2Q3TWN3 875 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Q3TYL0 343 aa16.75■□□□□ 0.27
Ssr1-204ENSMUST00000225319 Zscan22Q8BGS5 496 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 57.8 ms