RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Npc1l1Q6T3U4 1333 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Nup153E9Q3G8 1462 aaKnown RBP12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Gm20425E9Q035 978 aaKnown RBP12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 SrprbP47758 269 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Taf3Q5HZG4 932 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 MycbpapQ5SUV2 932 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Sass6Q80UK7 654 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Triml1Q8BVP1 470 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Trim11Q99PQ2 467 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Tnnt2P50752 301 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Frat1P70339 274 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Mdh1bQ5F204 500 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Zkscan4Q5SZT6 480 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Rtn1Q8K0T0 780 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Ripk4Q9ERK0 786 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Sel1lQ9Z2G6 790 aa12.16□□□□□ -0.46
Trim9-205ENSMUST00000221041 Izumo3A6PWV3 263 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Clec11aO88200 328 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Sdc2P43407 202 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Lamb3Q61087 1168 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Edrf1Q6GQV7 1239 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Fchsd1Q6PFY1 688 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Bola3Q8CEI1 110 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Ubac1Q8VDI7 409 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Slc5a4bQ91ZP4 660 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Kiaa0232Q80U59 1396 aaKnown RBP12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Krt24A1L317 512 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Map10Q8BJS7 891 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Alg3Q8K2A8 438 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Pcdhb22Q91XZ8 794 aa12.15□□□□□ -0.46
Trim9-205ENSMUST00000221041 Gm7347D3YYI9 267 aa12.15□□□□□ -0.47
Trim9-205ENSMUST00000221041 Oas2E9Q9A9 742 aa12.15□□□□□ -0.47
Trim9-205ENSMUST00000221041 Speer4aF8VPX6 267 aa12.15□□□□□ -0.47
Trim9-205ENSMUST00000221041 Q8BZJ8 459 aa12.15□□□□□ -0.47
Trim9-205ENSMUST00000221041 Trim29Q8R2Q0 587 aa12.15□□□□□ -0.47
Trim9-205ENSMUST00000221041 Bmp2kQ91Z96 1138 aa12.15□□□□□ -0.47
Trim9-205ENSMUST00000221041 1700029H14RikE9PY36 240 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Kmt5bQ3U8K7 883 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Otop3Q80UF9 577 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Myl6bQ8CI43 207 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Ciao1Q99KN2 339 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Trip6Q9Z1Y4 480 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Mtx1P47802 317 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Dynll1P63168 89 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Sun3Q5SS91 320 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Mknk2Q8CDB0 459 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Ehd4Q9EQP2 541 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Pfkfb1P70266 471 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Baiap2l1Q9DBJ3 514 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Dusp10Q9ESS0 483 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Hip1rQ9JKY5 1068 aa12.14□□□□□ -0.47
Trim9-205ENSMUST00000221041 Rnf123Q5XPI3 1314 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Plbd2Q3TCN2 594 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 L1td1Q587J6 782 aaKnown RBP12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Ctdspl2Q8BG15 465 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Olfm5Q8BU90 496 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Ccdc150Q8CDI7 1110 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Pnma3Q8JZW8 466 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Polr2dQ9D7M8 142 aaKnown RBP12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Homer1Q9Z2Y3 366 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Mroh6V9GX81 722 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Sept1P42209 366 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Exosc10P56960 887 aaKnown RBP12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Cep135Q6P5D4 1140 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Ankrd23Q812A3 306 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Cdca8Q8BHX3 289 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Sgsm1Q8BPQ7 1093 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Map2P20357 1828 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Kcnk13Q8R1P5 405 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Tktl2Q9D4D4 627 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Xpo4Q9ESJ0 1151 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Foxo3Q9WVH4 672 aa12.13□□□□□ -0.47
Trim9-205ENSMUST00000221041 Prr16A3KMN5 304 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Gm28047Q3US59 414 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 C87499Q3UX49 493 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Nxf2Q4ZGD8 691 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Tab2Q99K90 693 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Rgs9O54828 675 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Cyp2d9P11714 504 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Pald1P70261 859 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Rnf41Q8BH75 317 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Golph3lQ8R088 285 aaKnown RBP12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Wasf1Q8R5H6 559 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Mylk2Q8VCR8 613 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Naa16Q9DBB4 864 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Tbc1d8bA3KGB4 1114 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Gm4340L7N2C4 268 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Med1Q925J9 1575 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Chaf1aQ9QWF0 911 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Kcnh3Q9WVJ0 1095 aa12.12□□□□□ -0.47
Trim9-205ENSMUST00000221041 Ahnak2E9PYB0 1738 aaKnown RBP12.11□□□□□ -0.47
Trim9-205ENSMUST00000221041 Pde6aP27664 859 aa12.11□□□□□ -0.47
Trim9-205ENSMUST00000221041 Rrp1P56183 494 aaKnown RBP12.11□□□□□ -0.47
Trim9-205ENSMUST00000221041 Bag1Q60739 355 aa12.11□□□□□ -0.47
Trim9-205ENSMUST00000221041 Srp68Q8BMA6 625 aaKnown RBP12.11□□□□□ -0.47
Trim9-205ENSMUST00000221041 Sde2Q8K1J5 448 aaKnown RBP12.11□□□□□ -0.47
Trim9-205ENSMUST00000221041 Ube3bQ9ES34 1070 aa12.11□□□□□ -0.47
Trim9-205ENSMUST00000221041 Rims2Q9EQZ7 1530 aa12.11□□□□□ -0.47
Trim9-205ENSMUST00000221041 Pramel3A2AHA7 463 aa12.11□□□□□ -0.47
Trim9-205ENSMUST00000221041 Gm7903A2AWL1 463 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms