RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Vps18Q8R307 973 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Rbm5Q91YE7 815 aaKnown RBP13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 NsmfQ99NF2 532 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Elf2Q9JHC9 593 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Chaf1aQ9QWF0 911 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Gm20425E9Q035 978 aaKnown RBP13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 SrprbP47758 269 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Rrp1P56183 494 aaKnown RBP13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Kiaa0753Q6A000 959 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Tmem59lQ7TNI2 337 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ssfa2Q922B9 1252 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Aox4Q3TYQ9 1336 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Pde4bB1AWC9 736 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Stx8O88983 236 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Zhx1P70121 873 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Psmb7P70195 277 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Smarcc2Q6PDG5 1213 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Amigo3Q8C2S7 508 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 SnrkQ8VDU5 748 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Tab2Q99K90 693 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Tcof1O08784 1320 aaKnown RBP13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Nid2O88322 1403 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Krt24A1L317 512 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Cyp2c23E9Q5K4 494 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 C87499Q3UX49 493 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Necab1Q8BG18 352 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Cfap69Q8BH53 942 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Tsen34Q8BMZ5 316 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Snw1Q9CSN1 536 aaKnown RBP13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Psrc1Q9D0P7 329 aa13.94□□□□□ -0.18
Herc4-208ENSMUST00000219577 Mapkapk5O54992 473 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ccdc94Q9D6J3 314 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Irx4Q9QY61 515 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 RubcnlQ3TD16 648 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Cdkl5Q3UTQ8 938 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Otop3Q80UF9 577 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Bola3Q8CEI1 110 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Evc2Q8K1G2 1220 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Otud6bQ8K2H2 294 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 ZgpatQ8VDM1 511 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Riok1Q922Q2 567 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ifi35Q9D8C4 286 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 WtapQ9ER69 396 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Npc1l1Q6T3U4 1333 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Zscan20B2KFW1 1030 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Zfp91Q62511 572 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Dnaaf2Q8BPI1 814 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Polr2dQ9D7M8 142 aaKnown RBP13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Pard3Q99NH2 1333 aa13.93□□□□□ -0.18
Herc4-208ENSMUST00000219577 Rsph10bE9PYQ0 876 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 Pde8bE9Q4S1 865 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 Speer4dL7N216 212 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 LtkP08923 888 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 Paxbp1P58501 919 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 Cdcp1Q5U462 833 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 Sdc2P43407 202 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 SelenooQ9DBC0 667 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 Mast3Q3U214 1321 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 Pald1P70261 859 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 Klc3Q91W40 508 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 Cep89Q9CZX2 791 aa13.92□□□□□ -0.18
Herc4-208ENSMUST00000219577 Sipa1l2Q80TE4 1722 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Slc1a4O35874 532 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Cdca8Q8BHX3 289 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ubac1Q8VDI7 409 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 MycbpapQ5SUV2 932 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Esco1Q69Z69 843 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Baiap2l1Q9DBJ3 514 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ppp1r21Q3TDD9 780 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Gm28047Q3US59 414 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Sun3Q5SS91 320 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Bag1Q60739 355 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Morc2aQ69ZX6 1030 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Klhl30Q8C3F7 581 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Hip1rQ9JKY5 1068 aa13.91□□□□□ -0.18
Herc4-208ENSMUST00000219577 Cdhr2E9Q7P9 1308 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ccdc102aQ3TMW1 549 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Dhx40Q6PE54 779 aaKnown RBP13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ube2oQ6ZPJ3 1288 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Rtn1Q8K0T0 780 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Tubgcp2Q921G8 905 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Trim11Q99PQ2 467 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Kcnh3Q9WVJ0 1095 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ugt1a6bK9J7B2 531 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Pde6aP27664 859 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ugt1a6Q64435 531 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ugt1a7cQ6ZQM8 531 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Zfp397Q7TNK4 527 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ppp4r3bQ922R5 820 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Tlcd1Q99JT6 247 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Nfat5Q9WV30 1534 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Cyp2j7A0A140T8U1 504 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Nop2Q922K7 793 aaKnown RBP13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 ParvgQ9ERD8 331 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ptpn23Q6PB44 1692 aa13.9□□□□□ -0.18
Herc4-208ENSMUST00000219577 Grin1P35438 938 aa13.89□□□□□ -0.19
Herc4-208ENSMUST00000219577 Fam83bQ0VBM2 1012 aa13.89□□□□□ -0.19
Herc4-208ENSMUST00000219577 Mdh1bQ5F204 500 aa13.89□□□□□ -0.19
Herc4-208ENSMUST00000219577 Cyp24a1Q64441 514 aa13.89□□□□□ -0.19
Herc4-208ENSMUST00000219577 Mei4Q8BRM6 389 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms