RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Usp33Q8R5K2 909 aa17.77■□□□□ 0.44
Upf1-202ENSMUST00000215817 Pagr1aQ99L02 253 aa17.77■□□□□ 0.44
Upf1-202ENSMUST00000215817 Pdzrn3Q69ZS0 1063 aa17.77■□□□□ 0.44
Upf1-202ENSMUST00000215817 Cdan1Q8CC12 1239 aa17.77■□□□□ 0.44
Upf1-202ENSMUST00000215817 Slit1Q80TR4 1531 aa17.77■□□□□ 0.44
Upf1-202ENSMUST00000215817 Ttc41Q692V3 1318 aa17.77■□□□□ 0.43
Upf1-202ENSMUST00000215817 Zkscan16A2ALW2 728 aa17.77■□□□□ 0.43
Upf1-202ENSMUST00000215817 Mybl2P48972 704 aa17.77■□□□□ 0.43
Upf1-202ENSMUST00000215817 Chrna5Q2MKA5 467 aa17.77■□□□□ 0.43
Upf1-202ENSMUST00000215817 Tbc1d2bQ3U0J8 965 aa17.77■□□□□ 0.43
Upf1-202ENSMUST00000215817 CpzQ8R4V4 654 aa17.77■□□□□ 0.43
Upf1-202ENSMUST00000215817 Stk32bQ9JJX8 414 aa17.77■□□□□ 0.43
Upf1-202ENSMUST00000215817 Col16a1Q8BLX7 1580 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Gm29094F6Q785 221 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Unc5clQ6R653 518 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Fez1Q8K0X8 392 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Sept14Q9DA97 430 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Ube3bQ9ES34 1070 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Col20a1Q923P0 1320 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 LyarQ08288 388 aaKnown RBP17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Zbtb22Q9Z0G7 638 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Sept1P42209 366 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Dynll1P63168 89 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Snai1Q02085 264 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Gas2l3Q3UWW6 683 aa17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Ppp1r9bQ6R891 817 aaKnown RBP17.76■□□□□ 0.43
Upf1-202ENSMUST00000215817 Pde4aO89084 844 aa17.75■□□□□ 0.43
Upf1-202ENSMUST00000215817 Prpf38aQ4FK66 312 aaKnown RBP17.75■□□□□ 0.43
Upf1-202ENSMUST00000215817 NpeppsQ11011 920 aa17.75■□□□□ 0.43
Upf1-202ENSMUST00000215817 Gabpb2P81069 414 aa17.75■□□□□ 0.43
Upf1-202ENSMUST00000215817 Vgll3P85442 326 aa17.75■□□□□ 0.43
Upf1-202ENSMUST00000215817 Mroh6V9GX81 722 aa17.75■□□□□ 0.43
Upf1-202ENSMUST00000215817 Aox4Q3TYQ9 1336 aa17.75■□□□□ 0.43
Upf1-202ENSMUST00000215817 4930523C07RikE9Q2T4 99 aa17.75■□□□□ 0.43
Upf1-202ENSMUST00000215817 MycbpapQ5SUV2 932 aa17.75■□□□□ 0.43
Upf1-202ENSMUST00000215817 Apba2P98084 750 aa17.74■□□□□ 0.43
Upf1-202ENSMUST00000215817 Kmt5bQ3U8K7 883 aa17.74■□□□□ 0.43
Upf1-202ENSMUST00000215817 Ddx19aQ61655 478 aaKnown RBP17.74■□□□□ 0.43
Upf1-202ENSMUST00000215817 Znf496Q5SXI5 585 aa17.74■□□□□ 0.43
Upf1-202ENSMUST00000215817 Slfn1Q9Z0I7 337 aa17.74■□□□□ 0.43
Upf1-202ENSMUST00000215817 Lrrc2Q8VDB8 371 aa17.74■□□□□ 0.43
Upf1-202ENSMUST00000215817 Cul5Q9D5V5 780 aa17.74■□□□□ 0.43
Upf1-202ENSMUST00000215817 IcoslgQ9JHJ8 322 aa17.74■□□□□ 0.43
Upf1-202ENSMUST00000215817 Tnip1Q9WUU8 647 aa17.74■□□□□ 0.43
Upf1-202ENSMUST00000215817 Sept9Q80UG5 583 aa17.73■□□□□ 0.43
Upf1-202ENSMUST00000215817 Mrps27Q8BK72 415 aaKnown RBP17.73■□□□□ 0.43
Upf1-202ENSMUST00000215817 Hspd1P63038 573 aaKnown RBP17.73■□□□□ 0.43
Upf1-202ENSMUST00000215817 Pdia4P08003 638 aaKnown RBP17.73■□□□□ 0.43
Upf1-202ENSMUST00000215817 Nlrp9bQ66X22 1003 aa17.73■□□□□ 0.43
Upf1-202ENSMUST00000215817 Cfap70D3YVL2 1141 aa17.73■□□□□ 0.43
Upf1-202ENSMUST00000215817 Nfil3O08750 462 aa17.73■□□□□ 0.43
Upf1-202ENSMUST00000215817 Znf667Q2TL60 609 aa17.73■□□□□ 0.43
Upf1-202ENSMUST00000215817 HlfQ8BW74 295 aa17.73■□□□□ 0.43
Upf1-202ENSMUST00000215817 RabggtaQ9JHK4 567 aa17.73■□□□□ 0.43
Upf1-202ENSMUST00000215817 NfixP70257 488 aa17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 Tsr2Q8C8T8 191 aa17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 Stx6Q9JKK1 255 aa17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 Cacnb3P54285 484 aa17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 Znf653Q6YND2 615 aa17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 Mrpl44Q9CY73 333 aaKnown RBP17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 A0A1L1SQF0 893 aa17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 Gm10093D3YYI8 482 aa17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 Cyp3a57D3YYZ0 503 aa17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 Hdac1O09106 482 aaKnown RBP17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 Tacc1Q6Y685 774 aa17.72■□□□□ 0.43
Upf1-202ENSMUST00000215817 Ubxn2bQ0KL01 331 aa17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 Trim56Q80VI1 734 aaKnown RBP17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 Ranbp6Q8BIV3 1105 aa17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 SowahdQ8BY98 327 aa17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 Terf2O35144 541 aa17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 Tbc1d5Q80XQ2 815 aa17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 Epb41l3Q9WV92 929 aa17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 Mxd3Q80US8 206 aa17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 Psd3Q2PFD7 1037 aa17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 Fnbp4Q6ZQ03 1031 aa17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 Znf704Q9ERQ3 566 aa17.71■□□□□ 0.43
Upf1-202ENSMUST00000215817 PaoxQ8C0L6 504 aa17.7■□□□□ 0.42
Upf1-202ENSMUST00000215817 Ppp1r10Q80W00 888 aaKnown RBP17.7■□□□□ 0.42
Upf1-202ENSMUST00000215817 Trpc5Q9QX29 975 aa17.7■□□□□ 0.42
Upf1-202ENSMUST00000215817 Pcdhb9E9Q5G2 828 aa17.7■□□□□ 0.42
Upf1-202ENSMUST00000215817 Kif1aP33173 1695 aa17.7■□□□□ 0.42
Upf1-202ENSMUST00000215817 Tbc1d8bA3KGB4 1114 aa17.7■□□□□ 0.42
Upf1-202ENSMUST00000215817 Map9Q3TRR0 646 aa17.7■□□□□ 0.42
Upf1-202ENSMUST00000215817 Scaf8Q6DID3 1268 aa17.7■□□□□ 0.42
Upf1-202ENSMUST00000215817 Rtn1Q8K0T0 780 aa17.7■□□□□ 0.42
Upf1-202ENSMUST00000215817 Bloc1s2Q9CWG9 143 aa17.7■□□□□ 0.42
Upf1-202ENSMUST00000215817 AsnsQ61024 561 aa17.69■□□□□ 0.42
Upf1-202ENSMUST00000215817 Vmn1r199Q8R280 367 aa17.69■□□□□ 0.42
Upf1-202ENSMUST00000215817 Pcdhb22Q91XZ8 794 aa17.69■□□□□ 0.42
Upf1-202ENSMUST00000215817 Syt1P46096 421 aa17.69■□□□□ 0.42
Upf1-202ENSMUST00000215817 Samm50Q8BGH2 469 aa17.69■□□□□ 0.42
Upf1-202ENSMUST00000215817 Tmem179Q8BHH9 233 aa17.69■□□□□ 0.42
Upf1-202ENSMUST00000215817 Copb2O55029 905 aa17.69■□□□□ 0.42
Upf1-202ENSMUST00000215817 Exoc8Q6PGF7 716 aa17.69■□□□□ 0.42
Upf1-202ENSMUST00000215817 Slc39a11Q8BWY7 342 aa17.69■□□□□ 0.42
Upf1-202ENSMUST00000215817 Magea1O89006 320 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Magea5O89009 320 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Mx1P09922 631 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Ssh1Q76I79 1042 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Ubxn4Q8VCH8 506 aa17.68■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 97.7 ms