RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Krt20Q9D312 431 aa7.56□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Tex13c2A0A0G2JGA3 530 aa7.56□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Eftud2O08810 971 aaKnown RBP7.56□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Gsta4P24472 222 aa7.56□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Frat1P70339 274 aa7.56□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Jdp2P97875 163 aa7.56□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Gucy1a3Q9ERL9 691 aa7.56□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Gbp2Q9Z0E6 589 aa7.56□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Pde3aQ9Z0X4 1141 aa7.56□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Prr16A3KMN5 304 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Rpl13P47963 211 aaKnown RBP7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Atp1a4Q9WV27 1032 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Kcnh3Q9WVJ0 1095 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Speer4f2E9Q366 295 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Atp2a2O55143 1044 aaKnown RBP7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Krt13P08730 437 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Gm28047Q3US59 414 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Sp4Q62445 782 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Sdad1Q80UZ2 687 aaKnown RBP7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 A0A1W2P7S8 802 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Cdc5lQ6A068 802 aaKnown RBP7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 AdpgkQ8VDL4 496 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Eid1Q9DCR4 169 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Cib2Q9Z309 187 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Kif21aQ9QXL2 1672 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Mroh7A2AVR2 1279 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Sult6b1P0CC03 303 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Kiaa1328Q6NZK5 612 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Zkscan8Q8BSL0 588 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Gm29094F6Q785 221 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Atp6v0a2P15920 856 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Il4rP16382 810 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 U2af2P26369 475 aaKnown RBP7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Mnat1P51949 309 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Prkab2Q6PAM0 271 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Arfgap2Q99K28 520 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Nfil3O08750 462 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Cops6O88545 324 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Pdrg1P59048 133 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Kiaa1211Q5PR69 1207 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Itga6Q61739 1091 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Krt77Q6IFZ6 572 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Rbm33Q9CXK9 1231 aaKnown RBP7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Asxl2Q8BZ32 1370 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Apol7aB2RT54 418 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Kif22Q3V300 660 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Lin9Q8C735 542 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 NapgQ9CWZ7 312 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Fsip1Q9D3V5 435 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Hoxc9P09633 260 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Ints8Q80V86 995 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 SdsQ8VBT2 327 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Skor2A7M7C7 1008 aa7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 VimP20152 466 aaKnown RBP7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 PicalmQ7M6Y3 660 aaKnown RBP7.55□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Edc4Q3UJB9 1406 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Ranbp1P34022 203 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Psmc4P54775 418 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Eef1dP57776 281 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Pcdhb5Q91XZ5 792 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Naa16Q9DBB4 864 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Akap8Q9DBR0 687 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Tubb5P99024 444 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Ttll12Q3UDE2 639 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Atp1a2Q6PIE5 1020 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Talpid3E9PV87 1520 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Myl10Q62082 202 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Dclk3Q8BWQ5 790 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Myh10Q61879 1976 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Bin2D3Z6Q9 489 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Aifm3Q3TY86 605 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Pls1Q3V0K9 630 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Mdh1bQ5F204 500 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Ccdc38Q8CDN8 563 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Abcc4E9Q236 1325 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Arl1P61211 181 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Lrrc43Q3V0L5 667 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Leo1Q5XJE5 667 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Nap1l4Q78ZA7 375 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 HhatQ8BMT9 499 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Adcy3Q8VHH7 1145 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Eya2O08575 532 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Aox1O54754 1333 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Shroom2A2ALU4 1481 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Oas2E9Q9A9 742 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Slc27a3O88561 667 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Plcb3P51432 1234 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Rrp1P56183 494 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Nop2Q922K7 793 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Stk36Q69ZM6 1316 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Mybl2P48972 704 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Slc39a6Q8C145 765 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 RtcbQ99LF4 505 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Calml3Q9D6P8 149 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Gm5624F6ZZG8 207 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Clec11aO88200 328 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Parp1P11103 1013 aaKnown RBP7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 SpopQ6ZWS8 374 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Prpf40bQ80W14 870 aa7.54□□□□□ -1.2
Scn8a-205ENSMUST00000108910 Pnpla2Q8BJ56 486 aa7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms