RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Pfkfb1P70266 471 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cbx1P83917 185 aaKnown RBP13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Ccnl1Q52KE7 532 aaKnown RBP13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Nol10Q5RJG1 687 aaKnown RBP13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Nlrp9aQ66X03 949 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Zfp202Q8C879 641 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Luzp1Q8R4U7 1068 aaKnown RBP13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 ZgpatQ8VDM1 511 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Filip1Q9CS72 1211 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Creld2Q9CYA0 350 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Llgl2Q3TJ91 1027 aa13.46□□□□□ -0.25
Trim11-202ENSMUST00000108809 Gnl3lQ6PGG6 577 aaKnown RBP13.46□□□□□ -0.25
Trim11-202ENSMUST00000108809 Sptlc3Q8BG54 563 aa13.46□□□□□ -0.25
Trim11-202ENSMUST00000108809 Ift57Q8BXG3 429 aa13.46□□□□□ -0.25
Trim11-202ENSMUST00000108809 Xpo4Q9ESJ0 1151 aa13.46□□□□□ -0.25
Trim11-202ENSMUST00000108809 Naaladl2A0A0N4SUJ3 795 aa13.46□□□□□ -0.25
Trim11-202ENSMUST00000108809 Lipo1J3QME6 396 aa13.46□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cyp26a1O55127 497 aa13.46□□□□□ -0.25
Trim11-202ENSMUST00000108809 Vgll3P85442 326 aa13.46□□□□□ -0.25
Trim11-202ENSMUST00000108809 Epha2Q03145 977 aa13.46□□□□□ -0.25
Trim11-202ENSMUST00000108809 Sept1P42209 366 aa13.46□□□□□ -0.26
Trim11-202ENSMUST00000108809 Zbtb38Q3LR78 1197 aa13.46□□□□□ -0.26
Trim11-202ENSMUST00000108809 BcanQ61361 883 aa13.46□□□□□ -0.26
Trim11-202ENSMUST00000108809 Kiaa0753Q6A000 959 aa13.46□□□□□ -0.26
Trim11-202ENSMUST00000108809 Acap3Q6NXL5 833 aa13.46□□□□□ -0.26
Trim11-202ENSMUST00000108809 Grin2dQ03391 1323 aa13.45□□□□□ -0.26
Trim11-202ENSMUST00000108809 Prl3d1P18121 224 aa13.45□□□□□ -0.26
Trim11-202ENSMUST00000108809 Smg7Q5RJH6 1138 aaKnown RBP13.45□□□□□ -0.26
Trim11-202ENSMUST00000108809 Pde6aP27664 859 aa13.45□□□□□ -0.26
Trim11-202ENSMUST00000108809 Plekhf1Q3TB82 279 aa13.45□□□□□ -0.26
Trim11-202ENSMUST00000108809 Zfp397Q7TNK4 527 aa13.45□□□□□ -0.26
Trim11-202ENSMUST00000108809 Myh2G3UW82 1942 aa13.45□□□□□ -0.26
Trim11-202ENSMUST00000108809 Casp12O08736 419 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Mtx1P47802 317 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Kri1Q8VDQ9 704 aaKnown RBP13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 NenfQ9CQ45 171 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 U2af2P26369 475 aaKnown RBP13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Frat1P70339 274 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Prdm1Q60636 856 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Pcdhb14Q6PB90 796 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Fam43aQ8BUP8 424 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Riok1Q922Q2 567 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Odf2lQ9D478 642 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Large1Q9Z1M7 756 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Med23Q80YQ2 1367 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Setdb1O88974 1307 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 HdgfP51859 237 aaKnown RBP13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Kiaa0754Q69ZZ9 979 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Acnat2Q8BGG9 420 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Ehd2Q8BH64 543 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Ranbp6Q8BIV3 1105 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Bola3Q8CEI1 110 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Gpr108Q91WD0 569 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Zbtb43Q9DAI4 467 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 MetP16056 1379 aa13.44□□□□□ -0.26
Trim11-202ENSMUST00000108809 Brinp3Q499E0 766 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Panx2Q6IMP4 677 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Otud6bQ8K2H2 294 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Sirt2Q8VDQ8 389 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Acot9Q9R0X4 439 aaKnown RBP13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Stxbp4Q9WV89 557 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Foxo4Q9WVH3 505 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Pde8bE9Q4S1 865 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Metap2O08663 478 aaKnown RBP13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Cops6O88545 324 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Usp13Q5BKP2 858 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Vps37dQ810I0 261 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Bin2D3Z6Q9 489 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Bin1O08539 588 aaKnown RBP13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Fkbp1aP26883 108 aaKnown RBP13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Vps33aQ9D2N9 598 aa13.43□□□□□ -0.26
Trim11-202ENSMUST00000108809 Znf568E9PYI1 671 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Nbr1P97432 988 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Ankrd1Q9CR42 319 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Sil1Q9EPK6 465 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Slitrk3Q810B9 980 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Rcan1Q9JHG6 198 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Vnn1Q9Z0K8 512 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Atp8b5A3FIN4 1183 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Slc38a10Q5I012 1090 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Nme8Q715T0 586 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Nip7Q9CXK8 180 aaKnown RBP13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Fbxo3Q9DC63 480 aa13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Marf1Q8BJ34 1730 aaKnown RBP13.42□□□□□ -0.26
Trim11-202ENSMUST00000108809 Scn11aQ9R053 1765 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Mast3Q3U214 1321 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Myh3P13541 1940 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Cdc37Q61081 379 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 IqcgQ80W32 419 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 DymQ8CHY3 669 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 ApobrQ8VBT6 942 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Eaf2Q91ZD6 262 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Nek3Q9R0A5 511 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Hdac6Q9Z2V5 1149 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Kcnh4A2A5F7 1018 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Plbd2Q3TCN2 594 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Arhgef16Q3U5C8 713 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Cdkl5Q3UTQ8 938 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 Lrrc2Q8VDB8 371 aa13.41□□□□□ -0.26
Trim11-202ENSMUST00000108809 MbipQ99LQ1 341 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms