RNA–Protein interactions for RNA: ENSMUST00000078505.13

Rtn1-202, Transcript of Reticulon-1, mousemouse

TSL 1 (best) BASIC

Gene Rtn1, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1-202ENSMUST00000078505 Atp12aQ9Z1W8 1035 aa17.71■□□□□ 0.43
Rtn1-202ENSMUST00000078505 Npc1l1Q6T3U4 1333 aa17.71■□□□□ 0.43
Rtn1-202ENSMUST00000078505 Scaf1Q5U4C3 1256 aaKnown RBP17.71■□□□□ 0.43
Rtn1-202ENSMUST00000078505 Sik1Q60670 779 aa17.71■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Gabpb2P81069 414 aa17.7■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Cdcp1Q5U462 833 aa17.7■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Clic6Q8BHB9 596 aa17.7■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Prr5lA2AVJ5 370 aa17.7■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Gnl2Q99LH1 728 aaKnown RBP17.7■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Smarcc2Q6PDG5 1213 aa17.7■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Cfap69Q8BH53 942 aa17.7■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Fam102bQ8BQS4 339 aa17.7■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Riok1Q922Q2 567 aa17.7■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Grpel1Q99LP6 217 aa17.7■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Col4a1P02463 1669 aa17.69■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Speer4dL7N216 212 aa17.69■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Pfkfb1P70266 471 aa17.69■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Adam1bQ8R534 806 aa17.69■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Clec11aO88200 328 aa17.69■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Ddb1Q3U1J4 1140 aaKnown RBP17.69■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Ankrd40Q5SUE8 363 aa17.69■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Ctdspl2Q8BG15 465 aa17.69■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Q8BZJ8 459 aa17.69■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Iqca1Q9CUL5 857 aa17.69■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Gm20425E9Q035 978 aaKnown RBP17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 SrprbP47758 269 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Shisa4Q8CA71 197 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Large1Q9Z1M7 756 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 CltaO08585 235 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 XpcP51612 930 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Pald1P70261 859 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Zc3h12cQ5DTV4 884 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Zkscan4Q5SZT6 480 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Ift57Q8BXG3 429 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Xpo4Q9ESJ0 1151 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Mast3Q3U214 1321 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 U2af2P26369 475 aaKnown RBP17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Fam83bQ0VBM2 1012 aa17.68■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Dapk3O54784 448 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Stx8O88983 236 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Atp8a2P98200 1148 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Pex1Q5BL07 1284 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 ZyxQ62523 564 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Ehd4Q9EQP2 541 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Magi2Q9WVQ1 1275 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Trip6Q9Z1Y4 480 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 WtapQ9ER69 396 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Bola3Q8CEI1 110 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Ciao1Q99KN2 339 aa17.67■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Tcof1O08784 1320 aaKnown RBP17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Prl3d1P18121 224 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Dynll1P63168 89 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Ppp1r21Q3TDD9 780 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 C87499Q3UX49 493 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Ppp4r3bQ922R5 820 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Dbndd1Q9CZ00 160 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 ParvgQ9ERD8 331 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Pde6aP27664 859 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Pde4dQ01063 747 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Trim25Q61510 634 aaKnown RBP17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Cyp24a1Q64441 514 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Snw1Q9CSN1 536 aaKnown RBP17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Tns2Q8CGB6 1400 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Aox4Q3TYQ9 1336 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Gm21969J3QJZ1 289 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Tpm3P21107 285 aaKnown RBP17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Cep135Q6P5D4 1140 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Mroh6V9GX81 722 aa17.66■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Sept1P42209 366 aa17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Rrp1P56183 494 aaKnown RBP17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Snrpa1P57784 255 aaKnown RBP17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Tsen34Q8BMZ5 316 aa17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Ubac1Q8VDI7 409 aa17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Tktl2Q9D4D4 627 aa17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Letm1Q9Z2I0 738 aa17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Frat2Q8K025 231 aa17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Chaf1aQ9QWF0 911 aa17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Zeb2Q9R0G7 1215 aa17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Irs4Q9Z0Y7 1216 aa17.65■□□□□ 0.42
Rtn1-202ENSMUST00000078505 Tpm3-rs7D3Z2H9 248 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Rsph10bE9PYQ0 876 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Mctp2Q5RJH2 878 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Ttc27Q8CD92 847 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Stox1B2RQL2 990 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Smarcc1P97496 1104 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Ap5z1Q3U829 807 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Cdkl5Q3UTQ8 938 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 MycbpapQ5SUV2 932 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Cep89Q9CZX2 791 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Dennd3A2RT67 1274 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Zscan20B2KFW1 1030 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Qtrt2B8ZXI1 415 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Diaph1O08808 1255 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Tex2Q6ZPJ0 1128 aaKnown RBP17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Sept9Q80UG5 583 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Ccz1Q8C1Y8 480 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Rtn1Q8K0T0 780 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Hip1rQ9JKY5 1068 aa17.64■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Prss40A6H6T1 365 aa17.63■□□□□ 0.41
Rtn1-202ENSMUST00000078505 Znf568E9PYI1 671 aa17.63■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms