RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Rai2Q9QVY8 529 aa10.52□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 PogzQ8BZH4 1409 aaKnown RBP10.51□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Zc3h7aE9PWW6 970 aaKnown RBP10.51□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Ptpn11P35235 597 aa10.51□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 NxnP97346 435 aa10.51□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Shisa3Q3UPR0 238 aa10.51□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Ripor2Q80U16 1078 aa10.51□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Ubap2lQ80X50 1107 aaKnown RBP10.51□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Skor1Q8BX46 964 aa10.51□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Cuedc1Q8R3V6 388 aa10.51□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Trim42Q9D2H5 723 aa10.51□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Prl4a1O35256 227 aa10.5□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 FxnO35943 207 aa10.5□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Glis3Q6XP49 780 aa10.5□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Slitrk4Q810B8 837 aa10.5□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Olfr531Q8VGL2 304 aa10.5□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Foxp3Q99JB6 429 aa10.5□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Fzd5Q9EQD0 585 aa10.5□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Zeb2Q9R0G7 1215 aa10.5□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Dmp1O55188 503 aa10.49□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Hoxd9P28357 339 aa10.49□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Pwp2Q8BU03 919 aaKnown RBP10.49□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Vash1Q8C1W1 375 aa10.49□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Gas2l1Q8JZP9 678 aa10.49□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Serinc3Q9QZI9 472 aa10.49□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Shroom2A2ALU4 1481 aa10.49□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 TertO70372 1122 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Enpp1P06802 906 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Nme1P15532 152 aaKnown RBP10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Rac1P63001 192 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 PgrQ00175 926 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Proser1Q5PRE5 913 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Wbp4Q61048 376 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Igsf3Q6ZQA6 1194 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Dsg1bQ7TSF1 1060 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Trpa1Q8BLA8 1125 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 FlcnQ8QZS3 579 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Eps8l3Q91WL0 600 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Ift140E9PY46 1464 aa10.48□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Setd1bQ8CFT2 1985 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Prss51A0A286YDY8 319 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Nxpe3B9EKK6 559 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 DgkaO88673 730 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Gnb5P62881 395 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Kansl1lQ5DTI6 991 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Kremen2Q8K1S7 461 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Rbm33Q9CXK9 1231 aaKnown RBP10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Calr3Q9D9Q6 380 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Grin2bQ01097 1482 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Duox2A2AQ99 1517 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Rusc2Q80U22 1514 aa10.47□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Dthd1E9PZX1 795 aa10.46□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Xrcc6P23475 608 aa10.46□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Yap1P46938 488 aa10.46□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Adam2Q60718 735 aa10.46□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Myo6Q64331 1265 aa10.46□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Bola1Q9D8S9 137 aaKnown RBP10.46□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Swt1Q9DBQ9 907 aa10.46□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Pbrm1Q8BSQ9 1634 aaKnown RBP10.46□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Scamp3O35609 349 aa10.45□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Sox5P35710 763 aa10.45□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Foxd1Q61345 456 aa10.45□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 E2f5Q61502 335 aa10.45□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Cdca8Q8BHX3 289 aa10.45□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Steap3Q8CI59 488 aa10.45□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Lypd3Q91YK8 363 aa10.45□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Dcdc2cQ9D1B8 347 aa10.45□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Sec13Q9D1M0 322 aa10.45□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 EtfbQ9DCW4 255 aaKnown RBP10.45□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Pwwp2bE9Q9M8 600 aa10.44□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Dnmt3aO88508 908 aaKnown RBP10.44□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Hsp90aa1P07901 733 aaKnown RBP10.44□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Ighmbp2P40694 993 aa10.44□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Mterf2Q8BKY8 385 aa10.44□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Kbtbd11Q8BNW9 633 aa10.44□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 1700019A02RikA0A087WPV9 146 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Dennd3A2RT67 1274 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 MipepA6H611 711 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Gfra2O08842 464 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 AoahO35298 574 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 AmhP27106 555 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Bach2P97303 839 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Col6a1Q04857 1025 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Gpr15Q0VDU3 360 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Jade1Q6ZPI0 834 aaKnown RBP10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Zbtb9Q8CDC7 459 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Cyyr1Q8VIH7 165 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Prl2a1Q9JHK0 228 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 MyotQ9JIF9 496 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Polg2Q9QZM2 459 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Samd9lQ69Z37 1561 aa10.43□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Mamdc4A2AJA7 1228 aa10.42□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Foxc1Q61572 553 aa10.42□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 MylipQ8BM54 445 aa10.42□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Shisa4Q8CA71 197 aa10.42□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Inpp5fQ8CDA1 1132 aa10.42□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Osbpl1aQ91XL9 950 aa10.42□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Pagr1aQ99L02 253 aa10.42□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Jam3Q9D8B7 310 aa10.42□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Lypd2Q9DD23 127 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms