RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Nkx2-3P97334 362 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Wdr3Q8BHB4 942 aaKnown RBP9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Ppm1mQ8BU27 406 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Zfp202Q8C879 641 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 4930550L24RikQ99PA7 320 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Cdc45Q9Z1X9 566 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Gm43638A0A0J9YU36 694 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Rnaseh1O70338 285 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Adora1Q60612 326 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Ncaph2Q8BSP2 607 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Gdap1l1Q8VE33 370 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Hps3Q91VB4 1002 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Terf2ipQ91VL8 393 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Anapc4Q91W96 807 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Clic4Q9QYB1 253 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 AW822073A0A0N4SUK1 652 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Ppp4r3aQ6P2K6 820 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Wdr60Q8C761 999 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Sox30Q8CGW4 782 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Tada3Q8R0L9 432 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Kri1Q8VDQ9 704 aaKnown RBP9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Abcb6Q9DC29 842 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Snx1Q9WV80 522 aa9.47□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Gtf2f1Q3THK3 508 aaKnown RBP9.46□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Tbc1d1Q60949 1255 aa9.46□□□□□ -0.89
Cdc40-201ENSMUST00000044166 U2af1l4Q8BGJ9 220 aa9.46□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Cfap69Q8BH53 942 aa9.46□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Rec8Q8C5S7 591 aa9.46□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Arap3Q8R5G7 1538 aa9.46□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Slc35g1Q8BY79 368 aa9.46□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Brd3Q8K2F0 726 aaKnown RBP9.46□□□□□ -0.9
Cdc40-201ENSMUST00000044166 D430041D05RikF6ZGR6 1678 aa9.46□□□□□ -0.9
Cdc40-201ENSMUST00000044166 C3P01027 1663 aa9.46□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Pramel3A2AHA7 463 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Gm7903A2AWL1 463 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 AV320801A2AWL3 467 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Gm15023L7MUB4 467 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 EmbP21995 330 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Bag1Q60739 355 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 SdsQ8VBT2 327 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Gnl2Q99LH1 728 aaKnown RBP9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Grin2dQ03391 1323 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 InsrrQ9WTL4 1300 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Btn2a2A4QPC6 514 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Slc1a4O35874 532 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Gm28047Q3US59 414 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 LarsQ8BMJ2 1178 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Q8CEZ4 452 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Dis3l2Q8CI75 870 aaKnown RBP9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Akr1e2Q9DCT1 301 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Pus3Q9JI38 481 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 PsdQ5DTT2 1024 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Trim25Q61510 634 aaKnown RBP9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Adck5Q80V03 582 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ccdc155Q80VJ8 648 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Golim4Q8BXA1 655 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Filip1Q9CS72 1211 aa9.45□□□□□ -0.9
Cdc40-201ENSMUST00000044166 A0A1L1SQF0 893 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Pax3P24610 479 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Hspd1P63038 573 aaKnown RBP9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Pfkfb1P70266 471 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 NpeppsQ11011 920 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Hspa4Q61316 841 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 PrimpolQ6P1E7 537 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Zbtb40Q6PCS8 1258 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Dhx38Q80X98 1228 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Dctpp1Q9QY93 170 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Magi2Q9WVQ1 1275 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Nid2O88322 1403 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ppp1r37Q8BKR5 712 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Kirrel3Q8BR86 778 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Lmbrd2Q8C561 694 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Gimap6Q8K349 305 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Tgs1Q923W1 853 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Usp42B2RQC2 1324 aaKnown RBP9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Als2Q920R0 1651 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Tmem2Q5FWI3 1383 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 MafgO54790 162 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Myo1aO88329 1043 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Specc1lQ2KN98 1118 aaKnown RBP9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Nlrp1aQ2LKU9 1182 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Gas2l3Q3UWW6 683 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ddx49Q4FZF3 480 aaKnown RBP9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ncoa7Q6DFV7 943 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Tmem67Q8BR76 992 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 AidaQ8C4Q6 305 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Mtmr6Q8VE11 617 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Arl8aQ8VEH3 186 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Smc1aQ9CU62 1233 aaKnown RBP9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 MicalclQ9D5U9 680 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Atp1a4Q9WV27 1032 aa9.44□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ric1Q69ZJ7 1422 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Gng11P61953 73 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ccdc129Q14B48 1034 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ncoa4Q5U4H9 625 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Klhl23Q6GQU2 558 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ppp2r2cQ8BG02 447 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Kcnh5Q920E3 988 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Tpcn1Q9EQJ0 817 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Nek3Q9R0A5 511 aa9.43□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms