RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Hap1O35668 628 aa17.32■□□□□ 0.36
Nup54-201ENSMUST00000038514 LtkP08923 888 aa17.32■□□□□ 0.36
Nup54-201ENSMUST00000038514 Edrf1Q6GQV7 1239 aa17.32■□□□□ 0.36
Nup54-201ENSMUST00000038514 Abcf1Q6P542 837 aaKnown RBP17.32■□□□□ 0.36
Nup54-201ENSMUST00000038514 Fam53cQ8BXQ8 393 aa17.32■□□□□ 0.36
Nup54-201ENSMUST00000038514 MbipQ99LQ1 341 aa17.32■□□□□ 0.36
Nup54-201ENSMUST00000038514 Llgl2Q3TJ91 1027 aa17.32■□□□□ 0.36
Nup54-201ENSMUST00000038514 Ankib1Q6ZPS6 1085 aa17.32■□□□□ 0.36
Nup54-201ENSMUST00000038514 Crb1Q8VHS2 1405 aa17.32■□□□□ 0.36
Nup54-201ENSMUST00000038514 Kdm3aQ6PCM1 1323 aa17.32■□□□□ 0.36
Nup54-201ENSMUST00000038514 Cyp2d9P11714 504 aa17.31■□□□□ 0.36
Nup54-201ENSMUST00000038514 Mtmr6Q8VE11 617 aa17.31■□□□□ 0.36
Nup54-201ENSMUST00000038514 Tomm22Q9CPQ3 142 aa17.31■□□□□ 0.36
Nup54-201ENSMUST00000038514 FAM186AQ9D9R9 1790 aa17.31■□□□□ 0.36
Nup54-201ENSMUST00000038514 Cyp26a1O55127 497 aa17.31■□□□□ 0.36
Nup54-201ENSMUST00000038514 Sh3bp1P55194 680 aa17.31■□□□□ 0.36
Nup54-201ENSMUST00000038514 Pcdhb22Q91XZ8 794 aa17.31■□□□□ 0.36
Nup54-201ENSMUST00000038514 Tubb4aQ9D6F9 444 aa17.31■□□□□ 0.36
Nup54-201ENSMUST00000038514 Ktn1Q61595 1327 aaKnown RBP17.31■□□□□ 0.36
Nup54-201ENSMUST00000038514 Samd1D3YXK1 519 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 GmnnO88513 206 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Ftl2P49945 183 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Fam160b2Q80YR2 744 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Vps37dQ810I0 261 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Spata32Q8C5V0 334 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Magi2Q9WVQ1 1275 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Sycp2lA0A0M3U1B0 842 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Lipo1J3QME6 396 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Prdm1Q60636 856 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 IqcgQ80W32 419 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Etf1Q8BWY3 437 aaKnown RBP17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Alx1Q8C8B0 326 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Emilin1Q99K41 1017 aa17.3■□□□□ 0.36
Nup54-201ENSMUST00000038514 Cyp3a59D3Z2W7 503 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Metap2O08663 478 aaKnown RBP17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Kif2aP28740 705 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Spag5Q7TME2 1165 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Zkscan8Q8BSL0 588 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Tgs1Q923W1 853 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Myo3bQ1EG27 1305 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Serpinb6bO08804 377 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Igflr1Q3U4N7 345 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Arhgef16Q3U5C8 713 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 PsdQ5DTT2 1024 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Znf532Q6NXK2 1036 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Clca2Q8BG22 942 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 NenfQ9CQ45 171 aa17.29■□□□□ 0.36
Nup54-201ENSMUST00000038514 Plekhd1B2RPU2 505 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Gas2l3Q3UWW6 683 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Acap3Q6NXL5 833 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Ercc6lQ8BHK9 1240 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Lrrc2Q8VDB8 371 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 ChmQ9QXG2 665 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Pde6aP27664 859 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Cplx1P63040 134 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Prl2c1Q5SVL9 228 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Fez2Q6TYB5 348 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Abcb6Q9DC29 842 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Atp12aQ9Z1W8 1035 aa17.28■□□□□ 0.36
Nup54-201ENSMUST00000038514 Naaladl2A0A0N4SUJ3 795 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Dnajc25A2ALW5 357 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Atp8b5A3FIN4 1183 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Zfp597E9Q6S0 419 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Dapk3O54784 448 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Atp8a2P98200 1148 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Zbtb38Q3LR78 1197 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Kmt5bQ3U8K7 883 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Cdkl5Q3UTQ8 938 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Il17raQ60943 864 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Trak2Q6P9N8 913 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Ranbp6Q8BIV3 1105 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Bola3Q8CEI1 110 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Sil1Q9EPK6 465 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Kcnq5Q9JK45 933 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Greb1lB9EJV3 1913 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Lrp6O88572 1613 aa17.27■□□□□ 0.36
Nup54-201ENSMUST00000038514 Myh1Q5SX40 1942 aa17.27■□□□□ 0.35
Nup54-201ENSMUST00000038514 Gm21680A0A0G2JGR8 267 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Pde4bB1AWC9 736 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Pcdhb9E9Q5G2 828 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Znf326O88291 580 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Dnm1P39053 867 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Prpf4bQ61136 1007 aaKnown RBP17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Haus7Q8BKT8 364 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 DymQ8CHY3 669 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Fam114a1Q9D281 569 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Zbtb43Q9DAI4 467 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Cdc27A2A6Q5 825 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Anxa1P10107 346 aaKnown RBP17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Gpr182P43142 395 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 CebpaP53566 359 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Irx2P81066 474 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Ccdc102aQ3TMW1 549 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Gm12185Q5NCB2 835 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Nol10Q5RJG1 687 aaKnown RBP17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Cep120Q7TSG1 988 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Vps18Q8R307 973 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Nav1Q8CH77 1875 aa17.26■□□□□ 0.35
Nup54-201ENSMUST00000038514 Me1P06801 572 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Myo1bP46735 1107 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms