RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ankrd35E9Q9D8 996 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Kifap3P70188 793 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ranbp6Q8BIV3 1105 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Tmod2Q9JKK7 351 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ankrd44B2RXR6 993 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Myd88P22366 296 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Zfp91Q62511 572 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ppp1r10Q80W00 888 aaKnown RBP15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Egfem1Q8C088 590 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Cdr2P97817 455 aa15.58■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Apol7eQ3UZ24 369 aa15.58■□□□□ 0.09
Col5a1-201ENSMUST00000028280 DymQ8CHY3 669 aa15.58■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Sptlc2P97363 560 aaKnown RBP15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ccdc97Q9DBT3 340 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 MycbpQ9EQS3 103 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Gapvd1Q6PAR5 1458 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ubash3aQ3V3E1 624 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 GopcQ8BH60 463 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Pet2A2AHY8 747 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ppp1r14cQ8R4S0 164 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ttll12Q3UDE2 639 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Cplx3Q8R1B5 158 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Cct5P80316 541 aaKnown RBP15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Gngt1Q61012 74 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Znf18Q810A1 556 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Tshz3Q8CGV9 1081 aa15.58■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Eef1bO70251 225 aaKnown RBP15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 GabpaQ00422 454 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 SpopQ6ZWS8 374 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Zbtb41Q811F1 908 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Rab11fip4Q8BQP8 635 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Echdc1Q9D9V3 322 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Krt25Q8VCW2 446 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 RarsQ9D0I9 660 aaKnown RBP15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Rprd2Q6NXI6 1469 aaKnown RBP15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Frat1P70339 274 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Dcaf17Q3TUL7 519 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Rapgef1Q3UHC1 1224 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Kif17Q99PW8 1038 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Mug1P28665 1476 aa15.57■□□□□ 0.08
Col5a1-201ENSMUST00000028280 MarcksP26645 309 aaKnown RBP15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Pcdhb2Q91Y00 799 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Rps6ka2Q9WUT3 733 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Kif1bQ60575 1816 aaKnown RBP15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Q3TYL0 343 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Tmem87aQ8BXN9 555 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ttc4Q8R3H9 386 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Cnot6lQ8VEG6 555 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Atp2a3Q64518 1038 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 DlatQ8BMF4 642 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 ParvgQ9ERD8 331 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ncf2O70145 525 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ppp4r3aQ6P2K6 820 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Kdm1aQ6ZQ88 853 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 RalgapbQ8BQZ4 1484 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Sh3bp1P55194 680 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Gm136Q3V037 328 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Srek1ip1Q4V9W2 153 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Gzf1Q4VBD9 706 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Lonp1Q8CGK3 949 aaKnown RBP15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 FibpQ9JI19 357 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Nkx1-2P42580 305 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Slx4Q6P1D7 1565 aa15.56■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Cetn3O35648 167 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 GfapP03995 430 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Q4VA45 678 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Sept3Q9Z1S5 350 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Calm1P0DP26 149 aaKnown RBP15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Calm2P0DP27 149 aaKnown RBP15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Calm3P0DP28 149 aaKnown RBP15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 PhexP70669 749 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Nop9Q8BMC4 636 aaKnown RBP15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Stag1Q9D3E6 1258 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Unc13aQ4KUS2 1712 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Pik3ap1Q9EQ32 811 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 CadpsQ80TJ1 1355 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Sh3gl3Q62421 347 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Exoc3Q6KAR6 755 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ccdc105Q9D4K7 499 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 HnrnpcQ9Z204 313 aaKnown RBP15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Parp10Q8CIE4 960 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Uba5Q8VE47 403 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Svs3aF2Z472 265 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Gnat2P50149 354 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Krit1Q6S5J6 736 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Maip1Q8BHE8 291 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Slc14a2Q8R4T9 930 aa15.55■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Abcc5Q9R1X5 1436 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Gcc2Q8CHG3 1679 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ift81O35594 676 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Krt71Q9R0H5 524 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Prr29B1ARI9 187 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Gm5935Q497S0 212 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Slf2Q6P9P0 1278 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 AI481877A2ALV5 1481 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ercc5P35689 1170 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ribc1Q9D0B8 379 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Rbbp8nlA2ABX0 614 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Rpl13P47963 211 aaKnown RBP15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Lin9Q8C735 542 aa15.54■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms