RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Tm6sf1P58749 370 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Ccpg1Q640L3 753 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Zc3h12cQ5DTV4 884 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Kank4Q6P9J5 1016 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Znf18Q810A1 556 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Ttc27Q8CD92 847 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Calml3Q9D6P8 149 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 JmyQ9QXM1 983 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 MycbpapQ5SUV2 932 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Hook2Q7TMK6 716 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Ccdc14Q8K2J4 934 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Mcur1Q9CXD6 340 aa17.08■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Atg4a-psA0A0G2JFS9 396 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Ttll12Q3UDE2 639 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Cfap100Q80VN0 613 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Eif2aQ8BJW6 581 aaKnown RBP17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Atg4aQ8C9S8 396 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Farp2Q91VS8 1065 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Kdm5bQ80Y84 1544 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Tex13c2A0A0G2JGA3 530 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Gm29094F6Q785 221 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Camk4P08414 469 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 SlmapQ3URD3 845 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Tekt3Q6X6Z7 490 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Zscan22Q8BGS5 496 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Apol10bG3X9K7 334 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 EmbP21995 330 aa17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Rpl13P47963 211 aaKnown RBP17.07■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Ppp1r9aH3BJD6 1292 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Fermt1P59113 677 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Jade3Q6IE82 823 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Krit1Q6S5J6 736 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Hirip3Q8BLH7 601 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 HhatQ8BMT9 499 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 9230110C19RikQ8CC70 267 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Ubac1Q8VDI7 409 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Exoc5Q3TPX4 708 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Vps54Q5SPW0 977 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Prpf40bQ80W14 870 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 IqcdQ9D3V1 458 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Tpx2A2APB8 745 aaKnown RBP17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Atp2a2O55143 1044 aaKnown RBP17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 KaznQ69ZS8 779 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Ribc1Q9D0B8 379 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Mast3Q3U214 1321 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Myl3P09542 204 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Dzip1Q8BMD2 852 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Prex2Q3LAC4 1598 aa17.06■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Astn2Q80Z10 1352 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Drc1Q3USS3 753 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Abtb2Q7TQI7 1024 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Tpcn2Q8BWC0 731 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Polr2dQ9D7M8 142 aaKnown RBP17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Diaph2O70566 1098 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Stmn2P55821 179 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Nlrp2Q4PLS0 1046 aaKnown RBP17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Vps41Q5KU39 853 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Kif2bQ8C0N1 668 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Pak2Q8CIN4 524 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Palm3A2TJV2 734 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Pak1O88643 545 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Nop56Q9D6Z1 580 aaKnown RBP17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 ChkbO55229 394 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Lrrc2Q8VDB8 371 aa17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Edc4Q3UJB9 1406 aaKnown RBP17.05■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Prr29B1ARI9 187 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Cct5P80316 541 aaKnown RBP17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Igflr1Q3U4N7 345 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Lmbrd2Q8C561 694 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Cabp5Q9JLK3 173 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Sos2Q02384 1333 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Cep128Q8BI22 1102 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Olfm5Q8BU90 496 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Atp6v0a4Q920R6 833 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Tbc1d4Q8BYJ6 1307 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Sox13Q04891 613 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Ncf1Q09014 390 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Uba5Q8VE47 403 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Rfc1P35601 1131 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Pla2g4fQ50L41 855 aa17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Rbm17Q8JZX4 405 aaKnown RBP17.04■□□□□ 0.32
Col2a1-201ENSMUST00000023123 SkiQ60698 725 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 TnksQ6PFX9 1320 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Tex14Q7M6U3 1450 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 PpardP35396 440 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Rapgef1Q3UHC1 1224 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Rab3gap1Q80UJ7 981 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Etf1Q8BWY3 437 aaKnown RBP17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 SarnpQ9D1J3 210 aaKnown RBP17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Cd274Q9EP73 290 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Prl3d3A0A0M6L0J6 224 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Abcb4P21440 1276 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Pdrg1P59048 133 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Aifm3Q3TY86 605 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Atp1a3Q6PIC6 1013 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Rab44Q8CB87 725 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Ssh2Q5SW75 1423 aa17.03■□□□□ 0.32
Col2a1-201ENSMUST00000023123 CltaO08585 235 aa17.02■□□□□ 0.32
Col2a1-201ENSMUST00000023123 PparaP23204 468 aa17.02■□□□□ 0.32
Col2a1-201ENSMUST00000023123 Eps15P42567 897 aa17.02■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms